TB-Profiler
Home
Upload
SRA data
Rv0001
- c.1126C>T
Drug resistance types
162 Sensitive
6 RR-TB
18 HR-TB
61 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.7
247
lineage4.9
3
M.canetti;lineage4.9
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
lineage4.7;lineage4.8
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
lineage4.1.2.1;lineage4.7
1
lineage4.2.1.1;lineage4.7
1
lineage1.1.3.1
1
La1.7;lineage4.9
1
Showing 1 to 10 of 10 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
259
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR034513
Sensitive
lineage4.7
None
ERR1023372
Sensitive
lineage4.7
None
ERR1023402
MDR-TB
lineage4.7
None
ERR1034843
MDR-TB
lineage4.7
pt
ERR10465790
Sensitive
lineage4.7
None
ERR10465792
Sensitive
lineage4.7
None
ERR10465918
Sensitive
lineage4.7
None
ERR11043016
Sensitive
lineage4.7
None
ERR11043143
Sensitive
lineage4.7
None
ERR11043226
Sensitive
lineage4.7
None
Showing 1 to 10 of 259 entries
Previous
1
2
3
4
5
…
26
Next