Rv0001 - c.1126C>T
Drug resistance types
159 Sensitive
6 RR-TB
18 HR-TB
54 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 236 |
| lineage4.7;lineage4.8 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.9 | 3 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1;lineage4.7 | 1 |
| lineage4.2.1.1;lineage4.7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 248 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28646050 | Sensitive | lineage4.7 | None | ERR2199919 | Sensitive | lineage4.7 | de | SRR6785276 | MDR-TB | lineage4.7 | None | SRR28646103 | MDR-TB | lineage4.7 | None | SRR19303780 | Sensitive | lineage4.7 | None | ERR11080960 | Sensitive | lineage4.7 | None | ERR552030 | Sensitive | lineage4.7 | de | SRR10808717 | Sensitive | lineage4.7 | None | SRR1167141 | MDR-TB | lineage4.7 | None | ERR11043016 | Sensitive | lineage4.7 | None | SRR7069907 | Sensitive | lineage4.7 | None | ERR11068146 | Sensitive | lineage4.7 | None | ERR2512490 | Sensitive | lineage4.7 | gb | ERR4829366 | MDR-TB | lineage4.7 | it | ERR4829900 | HR-TB | lineage4.7;lineage4.8 | it | SRR29126936 | Sensitive | lineage4.7 | None | ERR11068441 | MDR-TB | lineage4.7 | None | SRR9738524 | MDR-TB | lineage4.7 | None | SRR1162835 | MDR-TB | lineage4.7 | None | ERR11081065 | Sensitive | lineage4.7 | None | ERR552300 | Sensitive | lineage4.7 | de | SRR5007157 | Sensitive | lineage4.7 | None | SRR6832081 | HR-TB | lineage4.7 | None | SRR29126556 | HR-TB | lineage4.7 | None | SRR1163015 | MDR-TB | lineage4.7 | None | ERR11043902 | Sensitive | lineage4.7 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4817050 | Sensitive | lineage4.7 | gb | SRR29273851 | MDR-TB | lineage4.7 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2514563 | Sensitive | lineage4.7 | gb | ERR552354 | Sensitive | lineage4.7 | de | ERR11068343 | Sensitive | lineage4.7 | None | ERR11081269 | MDR-TB | lineage4.7 | None | ERR11081303 | Sensitive | lineage4.7 | None | ERR6197035 | Sensitive | lineage4.7 | None | ERR983232 | MDR-TB | lineage4.7 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR11082418 | Sensitive | lineage4.7 | None | ERR6197693 | Sensitive | lineage4.7 | None | SAMN02414918 | MDR-TB | lineage4.7 | se | SRR7069145 | Sensitive | lineage4.7 | None | ERR7737755 | RR-TB | lineage4.7 | None | ERR11050913 | Sensitive | lineage4.7 | None | ERR2486980 | Sensitive | lineage4.7 | None | SRR7070496 | Sensitive | lineage4.7 | None | SRR24466764 | Sensitive | lineage4.7 | None | SRR29273865 | MDR-TB | lineage4.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR23339942 | Sensitive | lineage4.7 | None | ERR553311 | Sensitive | lineage4.7 | de | ERR552855 | Sensitive | lineage4.7 | None | ERR11050494 | Sensitive | lineage4.7 | None | ERR2513668 | Sensitive | lineage4.7 | gb | ERR867520 | Other | lineage4.7 | None | ERR4815842 | HR-TB | lineage4.7 | gb | ERR11044285 | Sensitive | lineage4.7 | None | ERR11050882 | Sensitive | lineage4.7 | None | SRR29273905 | MDR-TB | lineage4.7 | None | ERR11068326 | MDR-TB | lineage4.7 | None | ERR11068509 | Sensitive | lineage4.7 | None | SRR7069124 | Sensitive | lineage4.7 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR13289962 | Sensitive | lineage4.7 | None | SRR29681339 | HR-TB | lineage4.7 | None | SRR29539698 | HR-TB | lineage4.7 | None | SRR29539817 | MDR-TB | lineage4.7 | None | SRR29539291 | Sensitive | lineage4.7 | None | SRR29127077 | Sensitive | lineage4.7 | None | ERR279653 | Sensitive | lineage4.7 | None | ERR552837 | Sensitive | lineage4.7 | de | SRR7592358 | MDR-TB | lineage4.7 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR29273788 | MDR-TB | lineage4.7 | None | SRR29273659 | MDR-TB | lineage4.7 | None | ERR4829903 | Sensitive | lineage4.7 | it | ERR1367682 | Sensitive | lineage4.7 | None | SRR1144735 | MDR-TB | lineage4.7 | None | ERR13290446 | MDR-TB | lineage4.7 | None | ERR11082553 | Sensitive | lineage4.7 | None | ERR2864282 | MDR-TB | lineage4.7 | pt | ERR11050817 | Sensitive | lineage4.1.2.1;lineage4.7 | None | ERR10465790 | Sensitive | lineage4.7 | None | ERR10465918 | Sensitive | lineage4.7 | None | SAMEA3715438 | Sensitive | lineage4.7 | ch | ERR3273152 | RR-TB | lineage4.7 | None | ERR3639716 | MDR-TB | lineage4.7 | None | ERR11043803 | MDR-TB | lineage4.7 | None | SRR6480447 | Sensitive | lineage4.7 | None | SRR29274145 | Pre-XDR-TB | lineage4.7 | None | SRR7131155 | Sensitive | lineage4.7 | None | SRR21798481 | HR-TB | lineage4.7 | None | ERR5987346 | RR-TB | lineage4.7 | None | ERR2513582 | Sensitive | lineage4.7 | gb | ERR2514712 | Sensitive | lineage4.7 | gb | ERR13290449 | MDR-TB | lineage4.7 | None | SRR5818664 | Sensitive | lineage4.7 | None | ERR13284600 | MDR-TB | lineage4.7 | None | SRR29539777 | MDR-TB | lineage4.7 | None | ERR11081835 | Sensitive | lineage4.7 | None | SRR11972418 | MDR-TB | lineage4.7 | None | ERR4809182 | RR-TB | lineage4.7 | za | ERR4808865 | Other | lineage4.7 | None | SRR22048358 | MDR-TB | lineage4.7 | None | ERR553293 | Sensitive | lineage4.7 | de | ERR9119754 | RR-TB | lineage4.7 | None | SRR29539519 | Sensitive | lineage4.7 | None | SRR14801743 | HR-TB | lineage4.7 | None | ERR11043226 | Sensitive | lineage4.7 | None | SAMN02414943 | MDR-TB | lineage4.7 | se | SRR10525357 | Pre-XDR-TB | lineage4.7 | None | ERR4831318 | Sensitive | lineage4.7 | de | ERR11068997 | Sensitive | lineage4.7 | None | ERR10465792 | Sensitive | lineage4.7 | None | ERR11067766 | Sensitive | lineage4.7 | None | SRR1165415 | MDR-TB | lineage4.7 | None | ERR11044255 | Sensitive | lineage4.7 | None | SRR21798467 | HR-TB | lineage4.7 | None | SRR24466752 | Sensitive | lineage4.7 | None | ERR11081598 | Sensitive | lineage4.7 | None | ERR11081856 | Sensitive | lineage4.7 | None | ERR1367673 | Sensitive | lineage4.7 | None | ERR11043914 | Sensitive | lineage4.7 | None | SRR14782264 | Sensitive | lineage4.7 | None | ERR11081110 | Sensitive | lineage4.7 | None | ERR1023372 | Sensitive | lineage4.7 | None | ERR2512753 | Sensitive | lineage4.7 | gb | SRR19304126 | Sensitive | lineage4.7 | None | ERR11043898 | Sensitive | lineage4.7 | None | ERR550856 | Sensitive | lineage4.7 | de | ERR11082739 | Sensitive | lineage4.7 | None | SRR10525325 | MDR-TB | lineage4.7 | None | ERR1034843 | MDR-TB | lineage4.7 | pt | SRR21798469 | HR-TB | lineage4.7 | None | ERR1023402 | MDR-TB | lineage4.7 | None | SRR7068881 | Sensitive | lineage4.7 | None | SRR13232447 | Sensitive | lineage4.7 | None | ERR1465838 | Sensitive | lineage4.7 | None | ERR4827717 | Sensitive | lineage4.2.1.1;lineage4.7 | None | SRR6832410 | HR-TB | lineage4.7 | None | ERR13290448 | MDR-TB | lineage4.7 | None | ERR13267647 | Sensitive | lineage4.7 | None | SRR9738519 | MDR-TB | lineage4.7 | None | SRR18714970 | Sensitive | lineage4.7 | None | ERR1465862 | Sensitive | lineage4.7 | None | ERR1633958 | Sensitive | lineage4.7 | za | ERR2864274 | MDR-TB | lineage4.7 | pt | SRR1146421 | MDR-TB | lineage4.7 | None | ERR552069 | Sensitive | lineage4.7 | None | SRR5007176 | Sensitive | lineage4.7 | gb | SRR5007191 | Sensitive | lineage4.7 | gb | SRR7069132 | Sensitive | lineage4.7 | None | ERR11082184 | Sensitive | lineage4.7 | None | ERR867530 | Sensitive | lineage4.7 | None | ERR9125842 | Sensitive | lineage4.7 | None | SRR25395637 | Sensitive | lineage4.7 | None | ERR11067619 | Sensitive | lineage4.7 | None | SAMN02414940 | MDR-TB | lineage4.7 | se | SRR6046359 | Other | lineage4.7 | None | ERR4829297 | Sensitive | lineage4.7 | None | ERR11043802 | MDR-TB | lineage4.7 | None | ERR9121533 | Sensitive | lineage4.7 | None | SRR5007189 | Sensitive | lineage4.7 | None | ERR11043270 | Sensitive | lineage4.7 | None | ERR4830121 | Sensitive | lineage4.7 | None | ERR11067329 | HR-TB | lineage4.7 | None | SRR24673573 | Sensitive | lineage4.7 | None | SRR29539503 | Pre-XDR-TB | lineage4.7 | None | ERR11044671 | Sensitive | lineage4.7 | None | ERR4818487 | Sensitive | lineage4.7 | gb | ERR1367676 | Sensitive | lineage4.7 | None | SRR1167090 | MDR-TB | lineage4.7 | None | ERR4831316 | Sensitive | lineage4.7 | de | ERR551269 | Sensitive | lineage4.7 | de | ERR1465963 | Sensitive | lineage4.7 | ch | ERR4831142 | Sensitive | lineage4.7 | de | SRR21689681 | Sensitive | lineage4.7 | None | ERR11049021 | Sensitive | lineage4.7 | None | ERR11081204 | Sensitive | lineage4.7 | None | ERR13290447 | MDR-TB | lineage4.7 | None | ERR11043565 | Sensitive | lineage4.7 | None | SRR29126440 | Sensitive | lineage4.7 | None | SRR29126635 | Sensitive | lineage4.7 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR11082820 | MDR-TB | lineage4.7 | None | ERR11083148 | Sensitive | lineage4.7 | None | SRR7131207 | Sensitive | lineage4.7 | None | ERR11049933 | Sensitive | lineage4.7 | None | ERR11067354 | Sensitive | lineage4.7 | None | ERR11069019 | Sensitive | lineage4.7 | None | ERR11069015 | Sensitive | lineage4.7 | None | SRR21798447 | HR-TB | lineage4.7 | None | ERR552062 | Sensitive | lineage4.7 | de | ERR11043143 | Sensitive | lineage4.7 | None | SRR23862097 | Other | lineage4.7 | None | SRR29539342 | Sensitive | lineage4.7 | None | ERR551149 | Sensitive | lineage4.7 | de | DRR034513 | Sensitive | lineage4.7 | None | ERR11049645 | Sensitive | lineage4.7 | None | SRR14801583 | HR-TB | lineage4.7 | None | ERR6197691 | Sensitive | lineage4.7 | None | ERR11043324 | Sensitive | lineage4.7 | None | ERR11050985 | Sensitive | lineage4.7 | None | ERR2512782 | Sensitive | lineage4.7 | gb | ERR4195275 | Sensitive | lineage4.7 | None | ERR11043273 | Sensitive | lineage4.7 | None | ERR400339 | Sensitive | lineage4.7 | gb | ERR11068899 | Sensitive | lineage4.7 | None | SRR5065493 | Sensitive | lineage4.7 | vn | SRR28646077 | MDR-TB | lineage4.7 | None | SRR16057925 | Sensitive | lineage4.7 | None | ERR2513495 | Sensitive | lineage4.7 | gb | ERR11043389 | MDR-TB | lineage4.7 | None | ERR11067538 | Sensitive | lineage4.7 | None | SRR1166914 | MDR-TB | lineage4.7 | None | ERR11068151 | MDR-TB | lineage4.7 | None | SRR14782665 | Sensitive | lineage4.7 | None | ERR11082102 | Sensitive | lineage4.7 | None | SRR1162750 | MDR-TB | lineage4.7 | None | SRR24466796 | Pre-XDR-TB | lineage4.7 | None | ERR11049520 | Sensitive | lineage4.7 | None | ERR2486950 | Sensitive | lineage4.7 | None | ERR2486957 | Sensitive | lineage4.7 | None | ERR11050606 | Sensitive | lineage4.7 | None | ERR2199878 | Sensitive | lineage4.7 | de | ERR4829739 | Sensitive | lineage4.7 | None | ERR11067407 | Sensitive | lineage4.7 | None | SRR19303888 | Sensitive | lineage4.7 | None | SRR1163040 | MDR-TB | lineage4.7 | None | ERR9121205 | Sensitive | lineage4.7 | None | ERR13284955 | MDR-TB | lineage4.7 | None | ERR6197031 | Sensitive | lineage4.7 | None | ERR1465941 | Sensitive | lineage4.7 | None | ERR2486984 | Sensitive | lineage4.7 | None | ERR11081820 | Sensitive | lineage4.7 | None | SRR7592343 | MDR-TB | lineage4.7 | None | ERR552168 | Sensitive | lineage4.7 | de | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1166808 | MDR-TB | lineage4.7 | None | SRR23340015 | Sensitive | lineage4.7 | None | ERR4829565 | Sensitive | lineage4.7 | it | ERR6197029 | Other | lineage4.7 | None | ERR5865563 | MDR-TB | lineage4.7 | None | ERR551672 | Sensitive | lineage4.7 | de | ERR552489 | Sensitive | lineage4.7 | None | SRR1165398 | MDR-TB | lineage4.7 | None | ERR11068440 | Sensitive | lineage4.7 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None |
|---|
