Rv0006 - c.1318_1320delTTGinsCTA
Drug resistance types
0 Sensitive
1 RR-TB
29 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 3 |
| 39 | |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage2 | 3 |
| lineage4.8;La3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.3 | 4 |
| lineage4 | 5 |
| lineage3.1 | 2 |
| lineage2.1 | 2 |
| lineage4.1.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.8 | 2 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 75 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7585435 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR736874 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1172857 | MDR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173788 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184381 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR1710057 | Other | lineage2.1 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR176793 | Other | lineage4.1.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR2229542 | Other | lineage4.8 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341302 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818929 | HR-TB | None |
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