Rv0006 - c.1932C>T
Drug resistance types
7 Sensitive
0 RR-TB
47 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| 41 | |
| lineage4.1.1.3 | 2 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4 | 3 |
| lineage4.9 | 3 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.2.2 | 2 |
| lineage6.1.3 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR1035239 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675222 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675501 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2693239 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR1465797 | Sensitive | lineage4.1.2.1 | ba | SRR6046096 | Other | lineage4.1.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR5311081 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR5311099 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR4188350 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR6358837 | HR-TB | None | ERR736839 | Other | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR8976043 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR14801749 | Sensitive | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR1640750 | HR-TB | None |
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