Rv0006 - c.537C>G
Drug resistance types
4 Sensitive
1 RR-TB
44 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| 32 | |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage2.2.1 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.2.1 | 9 |
| lineage3 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9 | 13 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675482 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675383 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675545 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | SRR3675558 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2693239 | HR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6325447 | HR-TB | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6325442 | HR-TB | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR4188350 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13837514 | Sensitive | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861242 | Other | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13861224 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None |
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