Rv0529 - c.903G>C

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
21 Sensitive 2 RR-TB 11 HR-TB 2 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.9 30
lineage3 2
La1.7;lineage4.9 6
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage4.9 5
La1.7;lineage4.9;lineage6 1
La1.7 2
lineage2.2.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1.2 2
La1.7;M.canetti;lineage4.9 2
La2;lineage4.9 1
La1;lineage4.9 1
lineage4.3.4.2 1
lineage4 1
lineage4.3.2.1 1
La1.6;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
spoligotype Counts
spoligotype Count
None 62
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341384 HR-TB lineage4.9 None
ERR400529 Other lineage3 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR3675222 Other La1.7 None
ERR3797029 Other lineage4.9 None
SRR29097004 Other lineage3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970980 Other lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR3273109 HR-TB lineage4 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None