lineage | Count |
---|---|
La1;lineage4.9 | 1 |
La1.7;lineage4.9 | 5 |
lineage1.1.3.1 | 1 |
La1;lineage4.1.2 | 1 |
lineage4.9 | 23 |
lineage2.2 | 1 |
La2;lineage2.2 | 1 |
La2;lineage4.9 | 1 |
lineage4.3.2.1 | 1 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage4 | 2 |
La1.8.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La1.7 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
La3;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 47 |
ID | Drug resistance | Lineage | Country iso2 | SRR10808805 | Other | La1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None |
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