Rv1484 - c.-587_-586delAAinsTG
Drug resistance types
13 Sensitive
2 RR-TB
18 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.9 | 18 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 6 |
| lineage4.3.2;lineage4.9 | 1 |
| 16 | |
| lineage4.2;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 6 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La2;lineage4.9 | 1 |
| La3;lineage4.9 | 4 |
| lineage4 | 1 |
| lineage2.2.1 | 7 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.1.3 | 2 |
| lineage3 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;lineage4 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970980 | Other | lineage4.1.2 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR9786604 | Other | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4797201 | Other | None | SRR6789626 | Other | None | ERR4811311 | Other | None | SRR3675248 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR29093909 | Other | lineage4.9 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | Other | None | SRR7496509 | Other | None | ERR234659 | Other | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4800341 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4811075 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR9117721 | HR-TB | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR28119777 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4811105 | HR-TB | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4810741 | HR-TB | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4811142 | RR-TB | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None |
|---|
