Rv1484 - c.561T>C


Drug resistance types
11 Sensitive 5 RR-TB 14 HR-TB 9 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
La1.7;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.9 16
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.3.2.1 1
La3;lineage4.9 7
La1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage1.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
La1.7 2
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
lineage4 2
lineage1.1.3.1 1
M.canetti;lineage4.9 1
lineage2.2.1.1 1
lineage2.2.1 1
La1.7;M.canetti;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.8 1
La1.2;La1.8.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.1.2 1
lineage4.3.4.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675385 Other La1.7;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4796929 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4830353 Other La1.7 None
SRR3675446 RR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR3797064 Other La3;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
SRR10809074 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1063849 HR-TB lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR28351339 MDR-TB lineage4 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None