Rv1908c - c.486G>C
Drug resistance types
2 Sensitive
0 RR-TB
141 HR-TB
26 MDR-TB
36 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| 82 | |
| lineage4.1.1 | 1 |
| lineage4 | 16 |
| lineage2.2.1 | 30 |
| lineage2.2.2 | 19 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.5 | 5 |
| lineage2.2 | 24 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage3 | 4 |
| lineage4.4.2 | 5 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 17 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1 | 1 |
| lineage2 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4;lineage2.2.2 | 1 |
| lineage4.9;lineage2 | 1 |
| La3 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 223 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815604 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR3675221 | HR-TB | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | ERR212033 | HR-TB | None | ERR176751 | HR-TB | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR212123 | Other | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360577 | HR-TB | lineage3 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR5341470 | HR-TB | None | SRR6046397 | Other | None | SRR6044790 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046395 | HR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046540 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046644 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | None | ERR502532 | HR-TB | None | ERR5162122 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1035157 | Other | lineage4.9 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468644 | HR-TB | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR3797063 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4188247 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR6359045 | HR-TB | None | ERR5336148 | Other | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013599 | HR-TB | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013618 | MDR-TB | None | SRR1013617 | MDR-TB | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048983 | HR-TB | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1172728 | MDR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1173153 | HR-TB | None | SRR1172951 | Other | None | SRR1196546 | HR-TB | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1173400 | Other | None | SRR1174897 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None |
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