EBG00000313325 - n.406G>T


Drug resistance types
52 Sensitive 9 RR-TB 11 HR-TB 16 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.8 2
lineage1.1.3.2 2
6
lineage1.1.2 9
lineage5.1.2 1
lineage4.9;lineage4.3 1
lineage4.6.1.1 2
lineage2.2.1 11
lineage4.1.2.1 2
lineage3 8
lineage4.9 35
lineage4;lineage1.1 1
lineage1.2.2.2 2
lineage4.3.4.2.1 3
lineage4.1.3;lineage1.1.2 1
lineage3.1.2 1
lineage1.1.3.3 1
lineage4.9;lineage2.2 1
lineage3.1.1 2
lineage4.2.1.1 1
lineage2.2.1.2 1
La1.8.1 2
lineage4.3.3 2
lineage4.3.4.1 1
lineage4 4
lineage4;lineage3.1 1
lineage4.6.4 1
lineage4.3.4.2 1
lineage4.1.1.3 3
lineage2.2 2
lineage4.1.2 1
lineage2.2.1.1 2
lineage2.2.2 1
lineage4.9;lineage2.2.1 2
lineage4.9;lineage4.2.1 1
lineage4.6.1;lineage3.1.1 1
lineage3;lineage2.2 2
lineage4.6.1;lineage3.1 1
lineage4.4.1.1 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 123
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815278 Other lineage4.8 None
ERR176781 Sensitive lineage1.1.3.2 None
SRR3105762 HR-TB None
ERR1034791 RR-TB None
SAMN02599170 Sensitive lineage1.1.2 None
ERR4815985 Other lineage5.1.2 None
ERR4814573 Other lineage1.1.3.2 None
ERR164004 Sensitive lineage4.9;lineage4.3 None
ERR176547 Sensitive lineage4.6.1.1 None
SAMN02567685 Pre-XDR-TB lineage2.2.1 None
ERR4818188 Other lineage4.1.2.1 None
ERR4817817 Sensitive lineage3 None
ERR4818017 Sensitive lineage4.9 None
ERR4818404 Other lineage2.2.1 None
ERR245790 Sensitive None
ERR4819525 Other lineage3 None
ERR2515447 Sensitive lineage2.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
SRR6280286 Sensitive lineage2.2.1 None
SAMN02599061 MDR-TB lineage3 None
SAMN02598978 HR-TB lineage1.1.2 None
ERR4820524 Sensitive lineage4.9 None
ERR4820845 MDR-TB lineage4.8 None
ERR4820537 HR-TB lineage1.2.2.2 None
ERR2515999 Sensitive lineage4.3.4.2.1 None
ERR2747615 Sensitive lineage4.9 None
ERR2747622 Sensitive lineage4.9 None
SRR6046152 Other lineage4.9 None
ERR4822101 Sensitive lineage4.1.3;lineage1.1.2 None
ERR2747620 Sensitive lineage4.9 None
SRR6045683 Other lineage3.1.2 None
SRR6045312 Other lineage1.1.3.3 None
ERR502942 Sensitive lineage4.9 None
ERR4831633 RR-TB lineage4.9;lineage2.2 None
SRR6855957 Sensitive lineage2.2.1 None
ERR4816718 Other lineage4.1.2.1 gb
SRR6046766 Other lineage3.1.1 None
ERR4831631 HR-TB lineage4.9 None
SRR6855896 Other lineage4.3.4.2.1 None
ERR5162127 Sensitive lineage4.9 None
SRR7646056 Other lineage4.2.1.1 None
SRR7453031 Sensitive lineage2.2.1.2 None
SRR8600310 Other La1.8.1 None
SRR9224918 MDR-TB lineage4.3.3 None
ERR323057 Sensitive lineage4.9 None
ERR3468549 Sensitive lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796619 Other lineage4.3.3 None
ERR3283053 Other lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR3468754 Sensitive lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR4024975 Sensitive lineage4 None
ERR405222 Sensitive lineage4;lineage3.1 None
ERR4457784 Sensitive lineage4 None
ERR4188218 Sensitive lineage4.9 None
ERR736825 Sensitive lineage4.9 None
ERR4596906 Sensitive lineage1.1.2 None
ERR473308 HR-TB lineage4.3.4.2.1 None
ERR702437 HR-TB lineage4.6.4 None
ERR473311 Sensitive lineage4.9 None
ERR7801183 Other lineage4.3.4.2 None
ERR751414 MDR-TB lineage4 None
ERR736850 Sensitive lineage4.9 None
ERR773804 Sensitive lineage4.9 None
ERR970458 RR-TB lineage4.1.1.3 None
SRR1013527 RR-TB lineage2.2 None
ERR970457 RR-TB lineage4.1.1.3 None
ERR970455 RR-TB lineage4.1.2 None
ERR972801 RR-TB lineage2.2.1.1 None
SRR1013528 Pre-XDR-TB lineage2.2 None
SRR1013531 MDR-TB lineage4.9 None
SRR10869085 Sensitive lineage2.2.1 None
SRR1062865 HR-TB lineage2.2.2 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1141261 MDR-TB lineage4.9 None
SRR1106670 Other lineage4.9 None
SRR1173139 Sensitive lineage4.9 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1172322 Sensitive lineage1.1.2 None
SRR1172943 HR-TB lineage3 None
SRR1172949 Sensitive lineage1.1.2 None
SRR1173013 Sensitive lineage1.1.2 None
SRR1173190 Sensitive lineage4.9 None
SRR1173293 MDR-TB lineage4.6.1;lineage3.1.1 None
SRR1173269 Sensitive lineage4.9 None
SRR1173380 Pre-XDR-TB lineage3;lineage2.2 None
SRR1173335 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
SRR1173567 Other lineage3 None
SRR1173566 Other lineage1.1.2 None
SRR1173421 RR-TB lineage4.9 None
SRR1173508 Sensitive lineage4.9 None
SRR1173599 Sensitive lineage1.1.2 None
SRR1173705 Other lineage4.9 None
SRR1173704 Sensitive lineage4.6.1.1 None
SRR1173800 Pre-XDR-TB lineage3;lineage2.2 None
SRR1173719 HR-TB lineage3 None
SRR1173766 Sensitive lineage4.9 None
SRR1173799 MDR-TB lineage3.1.1 None
SRR1173764 Sensitive lineage4.9 None
SRR1173768 Sensitive lineage4.9 None
SRR1174277 Pre-XDR-TB lineage2.2.1 None
SRR1173833 Other lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
SRR1173832 MDR-TB lineage4.6.1;lineage3.1 None
SRR11972168 Sensitive lineage3 None
SRR1174291 HR-TB lineage1.1.2 None
SRR1175151 MDR-TB lineage3 None
SRR1181051 MDR-TB lineage4.4.1.1 None
SRR1174295 HR-TB lineage1.2.2.2 None
SRR11972157 MDR-TB lineage2.2.1 None
SRR11972164 MDR-TB lineage2.2.1.1 None
SRR13591377 Sensitive lineage4.1.1.3 None
SRR11972450 MDR-TB lineage2.2.1 None
SRR16156291 Other lineage4.9 None
SRR13591376 Sensitive lineage4.3.2 None
SRR15368973 Other None
SRR1791910 Other None
SRR16157045 Sensitive lineage4.9 None
SRR19303931 Other lineage2.2.1 None