EBG00000313325 - n.406G>T
Drug resistance types
57 Sensitive
9 RR-TB
13 HR-TB
18 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 35 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1 | 14 |
| La1.8.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2 | 9 |
| lineage4 | 4 |
| lineage4;lineage3.1 | 1 |
| lineage4.6.4 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.2 | 1 |
| lineage2.2 | 2 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3 | 8 |
| 6 | |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage3.1.1 | 3 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.8 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage5.1.2 | 1 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.4 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage1.1.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831631 | HR-TB | lineage4.9 | None | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR6855896 | Other | lineage4.3.4.2.1 | None | SRR6855957 | Sensitive | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | SRR8600310 | Other | La1.8.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR9224918 | MDR-TB | lineage4.3.3 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR3797060 | Other | La1.8.1 | None | ERR4024975 | Sensitive | lineage4 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR4457784 | Sensitive | lineage4 | None | ERR751414 | MDR-TB | lineage4 | None | ERR473308 | HR-TB | lineage4.3.4.2.1 | None | ERR702437 | HR-TB | lineage4.6.4 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR7801183 | Other | lineage4.3.4.2 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | SRR1013531 | MDR-TB | lineage4.9 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1172322 | Sensitive | lineage1.1.2 | None | SRR1172949 | Sensitive | lineage1.1.2 | None | SRR1172943 | HR-TB | lineage3 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173013 | Sensitive | lineage1.1.2 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173599 | Sensitive | lineage1.1.2 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173567 | Other | lineage3 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174295 | HR-TB | lineage1.2.2.2 | None | SRR11972157 | MDR-TB | lineage2.2.1 | None | SRR1174291 | HR-TB | lineage1.1.2 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1181051 | MDR-TB | lineage4.4.1.1 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR11972168 | Sensitive | lineage3 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR16156291 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR1791910 | Other | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4815278 | Other | lineage4.8 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR3105762 | HR-TB | None | ERR4814585 | Other | lineage4.6.2.2 | gb | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR4814961 | Sensitive | lineage4.1.2.1 | gb | SAMN02599170 | Sensitive | lineage1.1.2 | None | ERR4815985 | Other | lineage5.1.2 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR4818017 | Sensitive | lineage4.9 | None | ERR4817817 | Sensitive | lineage3 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR4818404 | Other | lineage2.2.1 | None | ERR4818188 | Other | lineage4.1.2.1 | None | ERR4818312 | Sensitive | lineage4.4 | gb | ERR245790 | Sensitive | None | ERR2515447 | Sensitive | lineage2.2.1 | None | ERR4817564 | Sensitive | lineage4.8 | gb | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | SAMN02598978 | HR-TB | lineage1.1.2 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4820524 | Sensitive | lineage4.9 | None | ERR2515999 | Sensitive | lineage4.3.4.2.1 | None | ERR4820537 | HR-TB | lineage1.2.2.2 | None | ERR2516755 | HR-TB | lineage3.1.1 | gb | ERR2747615 | Sensitive | lineage4.9 | None | ERR2747620 | Sensitive | lineage4.9 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819525 | Other | lineage3 | None | ERR4820845 | MDR-TB | lineage4.8 | None | SRR6045683 | Other | lineage3.1.2 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR6046152 | Other | lineage4.9 | None | ERR4829540 | Sensitive | lineage4.1.2.1 | it | SRR6045312 | Other | lineage1.1.3.3 | None | ERR4829618 | Sensitive | lineage4.1.2.1 | it | SRR6046766 | Other | lineage3.1.1 | None |
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