EBG00000313325 - n.837_842delTTGGGAinsGGGAC
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 7 |
| lineage4.2.1.1 | 1 |
| lineage3.1.1 | 4 |
| lineage4.9 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage2.2.1 | 9 |
| lineage1.2.2.2 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3 | 3 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.2.2.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4 | 2 |
| lineage4.3.4.2 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7068873 | Other | lineage4.8 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR7070087 | Other | lineage4.8.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR7068927 | Other | lineage1.2.2.2 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7069802 | Other | lineage3 | None | SRR6046517 | Other | lineage4.8 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | SRR6045683 | Other | lineage3.1.2.1;lineage4 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR7069193 | Other | lineage4.3.1.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342646 | HR-TB | lineage3 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR7069917 | Other | lineage4.2.2.2 | None | SRR7069917 | Other | lineage4.2.2.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR7069946 | Other | lineage4.8 | None | SRR3675513 | Other | lineage4.8 | None | SRR11349189 | MDR-TB | lineage4.1.1.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR7069783 | Other | lineage4.1.2.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR3675265 | Other | lineage4 | None | SRR3675565 | Other | lineage4 | None | SRR6046117 | Other | lineage4.9 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR9117806 | Other | lineage4.8 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | SRR3675447 | Other | lineage3 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR11342669 | Other | lineage4.8 | None |
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