EBG00000313325 - n.862A>G
Drug resistance types
43 Sensitive
7 RR-TB
10 HR-TB
11 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 5 |
| lineage2.2.1 | 9 |
| lineage4.9 | 27 |
| La1.2.BCG | 8 |
| lineage2.2.2 | 5 |
| lineage3.1;lineage4.6.1.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.8 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage3 | 8 |
| lineage4.6.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1.2.2.2 | 4 |
| lineage5.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 100 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR970458 | RR-TB | lineage4.1.1.3 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | SRR1062865 | Sensitive | lineage2.2.2 | None | SRR1173565 | MDR-TB | lineage3.1;lineage4.6.1.1 | None | SRR7443730 | Sensitive | lineage4.9 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | SRR8380864 | Other | lineage2.2.1.2 | None | SRR1165236 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796599 | Other | lineage4.8 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1915490 | Other | La1.2.BCG | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | SRR1915486 | HR-TB | La1.2.BCG | None | SRR7443733 | Sensitive | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SAMN02599089 | MDR-TB | lineage3 | None | SRR1173367 | MDR-TB | lineage3 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR7755733 | MDR-TB | lineage4.3.3 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7444102 | Sensitive | lineage4.9 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR3283051 | Other | lineage4.9 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR7443731 | Sensitive | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR7444103 | Sensitive | lineage4.9 | None | SRR12634543 | Sensitive | lineage4.8 | None | ERR1140792 | HR-TB | lineage5.1 | None | SRR1172915 | Other | lineage1.2.1.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1915482 | HR-TB | La1.2.BCG | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | SRR1167264 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | ERR1140774 | Sensitive | lineage5.1.1 | None | SRR1915483 | HR-TB | La1.2.BCG | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR7443722 | Sensitive | lineage4.9 | None | SRR5341346 | Sensitive | lineage3 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR3283043 | Other | lineage4.9 | None | SRR1173621 | MDR-TB | lineage3 | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR972802 | RR-TB | lineage4.1.1.3 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR7443769 | Sensitive | lineage4 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR1140799 | Sensitive | lineage4.2.1.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02599071 | Sensitive | lineage3 | None | SRR1173705 | Other | lineage4.9 | None | SRR7443768 | Sensitive | lineage4.9 | None | SRR1915489 | HR-TB | La1.2.BCG | None | SRR7443757 | Sensitive | lineage4.9 | None | SRR1174277 | HR-TB | lineage2.2.1 | None | SRR7443725 | Sensitive | lineage4.9 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None |
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