EBG00000313325 - n.862A>G
Drug resistance types
49 Sensitive
10 RR-TB
6 HR-TB
25 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| lineage1.2.2.2 | 6 |
| lineage3 | 16 |
| lineage1.1.3.2 | 2 |
| lineage4.4 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2 | 3 |
| lineage4.4.1.1 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.1.3 | 1 |
| lineage2.2.2 | 3 |
| lineage4.9 | 26 |
| 3 | |
| lineage2.2.1.2 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4 | 3 |
| lineage4.8 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 5 |
| lineage2.2 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 131 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19303931 | Other | lineage2.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4814565 | Sensitive | lineage4.4 | None | ERR4814573 | Other | lineage1.1.3.2 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | ERR4816103 | Sensitive | lineage3 | gb | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SRR3732647 | MDR-TB | lineage4.1.3 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR5485513 | RR-TB | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR245790 | Sensitive | None | SRR8380864 | Other | lineage2.2.1.2 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR4817817 | Sensitive | lineage3 | None | ERR2513090 | Sensitive | lineage4.3.4.2.1 | gb | ERR4818116 | Other | lineage4.3.4.2 | None | SRR5152904 | Other | lineage2.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SAMN02599071 | Sensitive | lineage3 | None | ERR4821775 | Other | lineage4 | None | ERR4820845 | MDR-TB | lineage4.8 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341346 | Sensitive | lineage3 | None | ERR4821051 | Other | lineage1.2.1.2.1 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4828749 | Sensitive | lineage2.2.1 | None | SRR8217938 | Sensitive | lineage2.2 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7755705 | MDR-TB | lineage4.2.1;lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796599 | Other | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR3468789 | Sensitive | lineage4.9 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR751414 | MDR-TB | lineage4 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR9030526 | Pre-XDR-TB | lineage2.2.1 | None | ERR9117787 | Sensitive | lineage2.2.1 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR972802 | RR-TB | lineage4.1.1.3 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1167264 | Pre-XDR-TB | lineage2.2 | None | SRR1106670 | Other | lineage4.9 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1165236 | Pre-XDR-TB | lineage2.2 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173045 | Sensitive | lineage3 | None | SRR1172915 | Other | lineage1.2.1.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173310 | MDR-TB | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173367 | MDR-TB | lineage3 | None | SRR1173445 | Sensitive | lineage3 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1175131 | Sensitive | lineage2.2.1 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None |
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