EBG00000313339 - n.1640C>T
Drug resistance types
18 Sensitive
1 RR-TB
11 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.1.2.1 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage2.2.1 | 2 |
| lineage4.8 | 2 |
| lineage2.2.1.2 | 1 |
| lineage2.2 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.2.1.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 50 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR926165 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | SRR2100305 | Sensitive | lineage4.8 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR114456 | Sensitive | lineage4.8 | None | DRR188519 | Other | lineage4.4.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR3801503 | Sensitive | lineage4.6.2.2 | None |
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