Rv0667 - c.3073_3075delATGinsCC
Drug resistance types
11 Sensitive
37 RR-TB
48 HR-TB
35 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 73 |
| lineage4.8 | 7 |
| lineage4.1.2.1 | 2 |
| La1.7.X-unk4 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 19 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.8.1 | 2 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3 | 3 |
| La2;lineage2.2 | 1 |
| lineage4.3.3 | 6 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1 | 5 |
| lineage1.1.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.2.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.4 | 1 |
| lineage2;lineage4 | 1 |
| 2 | |
| lineage4.4.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.8.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4 | 2 |
| lineage3;lineage4 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.2;lineage4 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 183 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341453 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR4769493 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR7535082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR3078008 | MDR-TB | lineage4.6.1.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675246 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4797184 | HR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1180446 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR1063896 | HR-TB | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4797474 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR7236177 | Other | La1.8.1 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR4796577 | HR-TB | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None |
|---|
