Rv1305 - c.45G>C


Drug resistance types
4 Sensitive 2 RR-TB 34 HR-TB 11 MDR-TB 2 Pre-XDR-TB 3 XDR-TB 33 Other
lineage Counts
lineage Count
lineage4.9 18
La3;lineage4.9 3
lineage2.1;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.2 2
lineage4.9;lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4 1
lineage2.2 2
La3;M.canetti;lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
La1.7;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.2.1 3
lineage4.3.4.1 2
lineage2.1 1
lineage4.3.4.2.1 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage3.1 1
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.9;lineage7 1
La3;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.8 1
spoligotype Counts
spoligotype Count
None 89
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815441 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4811493 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6045217 Sensitive lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4818929 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR29093909 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR25827682 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR21277373 Sensitive lineage2.2.1 None
SRR14782054 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR6359082 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
ERR4799025 Other lineage4.8 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR28119753 Other lineage4.9 None