Rv1484 - c.-545_-544delCGinsAA
Drug resistance types
13 Sensitive
1 RR-TB
12 HR-TB
4 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9 | 13 |
| La1.6;lineage4 | 1 |
| La1.7;M.canetti;lineage4.9 | 4 |
| La3;lineage4.9 | 7 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage5.2 | 2 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| 1 | |
| lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4 | 1 |
| La1.7 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045555 | Other | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786843 | Other | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR3283028 | Other | La3;lineage4 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None |
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