Rv3245c - c.981C>T
Drug resistance types
2 Sensitive
9 RR-TB
3 HR-TB
17 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 1 |
| La3;lineage1.1.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.2 | 3 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| La1;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage4.9 | 6 |
| lineage4.4.1.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 1 | |
| M.canetti;lineage4.9 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.1.1.2 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26399973 | Other | La3;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR2124104 | Sensitive | lineage1.1.2 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR17658017 | Sensitive | lineage1.1.2 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3132248 | Other | lineage1.1.2 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1184372 | MDR-TB | None | ERR1035157 | Other | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6789621 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1172817 | Other | La3 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR5341456 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
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