lineage | Count |
---|---|
84 | |
lineage4 | 4 |
lineage4.9 | 4 |
La1 | 1 |
lineage3.1.2 | 1 |
lineage2.2 | 3 |
lineage2.2.1.1 | 2 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage2.2.1 | 1 |
lineage4.1.2.1 | 1 |
La2 | 1 |
lineage3.1 | 2 |
spoligotype | Count |
---|---|
None | 106 |
ID | Drug resistance | Lineage | Country iso2 | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR4188350 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR4769521 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR6358837 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736835 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | SRR1174897 | HR-TB | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR6325445 | HR-TB | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675234 | Other | None | SRR3675545 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675502 | Other | None | SRR3675501 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR1035162 | Other | None | SRR5341418 | Other | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6256988 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323039 | HR-TB | None | ERR294248 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3797014 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3439432 | Other | None | ERR3797016 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797017 | Other | None |
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