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SRA data
Rv3854c
- c.-856C>G
Drug resistance types
415 Sensitive
19 RR-TB
31 HR-TB
34 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.6.1.1
509
lineage4.6.1.1;lineage4.6.1.2
5
lineage4.3.3;lineage4.3.4.2;lineage4.6.1.1
2
lineage4.3.4.2;lineage4.6.1.1
2
lineage4.3.4.1
2
lineage1.1.2;lineage3.1.1;lineage4.6.1.1
1
lineage1.1.2;lineage3.1.1;lineage4
1
lineage4.1.1.3;lineage4.6.1.1
1
lineage1.1.2;lineage3.1.1;lineage4.6.1
1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
529
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR028329
Sensitive
lineage4.6.1.1
None
ERR028335
Sensitive
lineage4.6.1.1
None
ERR038738
RR-TB
lineage4.6.1.1
ug
ERR1023383
Other
lineage4.6.1.1
None
ERR10969148
Sensitive
lineage4.3.4.1
None
ERR11049236
Sensitive
lineage4.3.4.1
None
ERR11049258
Sensitive
lineage4.6.1.1
None
ERR11050951
Sensitive
lineage4.6.1.1
None
ERR11067995
Sensitive
lineage4.6.1.1
None
ERR11068097
Sensitive
lineage4.6.1.1
None
Showing 1 to 10 of 529 entries
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