SRR1140677
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR7801232
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359039
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634533
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR19428502
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198992
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR987785
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR6359062
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9125367
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198996
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199032
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR6358846
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6358848
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6358883
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR2512667
|
Sensitive
|
lineage4.6.1.1
|
gb
|
SRR12634608
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199039
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4820460
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199084
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1023383
|
Other
|
lineage4.6.1.1
|
None
|
ERR1199031
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199029
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199036
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR7070390
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049719
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634571
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198987
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199094
|
HR-TB
|
lineage4.6.1.1
|
ug
|
SAMN02380996
|
MDR-TB
|
lineage4.6.1.1
|
ug
|
ERR987730
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR3275275
|
Sensitive
|
lineage4.6.1.1
|
nl
|
ERR3470631
|
Other
|
lineage4.6.1.1
|
None
|
SRR1140587
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR3132256
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR1199055
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR7069217
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535081
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535084
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4814370
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4817136
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR18337416
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198997
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR2503479
|
Sensitive
|
lineage4.6.1.1
|
fi
|
ERR6358849
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6358884
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535064
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535083
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR266519
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359076
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9285815
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199012
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SAMN02567676
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR19409781
|
Sensitive
|
lineage1.1.2;lineage3.1.1;lineage4
|
None
|
ERR987723
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1174281
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358708
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4821879
|
Other
|
lineage4.6.1.1
|
None
|
SRR19392994
|
Sensitive
|
lineage1.1.2;lineage3.1.1;lineage4.6.1
|
None
|
ERR987740
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634532
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR163979
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR11466323
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR18337369
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634579
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535038
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR1199136
|
HR-TB
|
lineage4.6.1.1
|
ug
|
ERR176547
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11775865
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR6359014
|
RR-TB
|
lineage4.6.1.1
|
None
|
SRR21690627
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049647
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR16058429
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049720
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4818187
|
Other
|
lineage4.6.1.1
|
gb
|
SAMN02381045
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR234173
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR7801223
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801233
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358864
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR12634594
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4816570
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR551416
|
Sensitive
|
lineage4.6.1.1
|
cg
|
ERR552052
|
Sensitive
|
lineage4.6.1.1
|
cg
|
ERR1199046
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR1198976
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358899
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199013
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199030
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199090
|
Other
|
lineage4.6.1.1
|
ug
|
SRR1173344
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634625
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535054
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198975
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR19317586
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR12634547
|
Sensitive
|
lineage4.6.1.1;lineage4.6.1.2
|
None
|
ERR1199019
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199015
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1198986
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358722
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR1198993
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR3470574
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359009
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198974
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199008
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199028
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR7535055
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR7535066
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535093
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4821685
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR234172
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR6359104
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359114
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4822125
|
Other
|
lineage4.6.1.1
|
None
|
ERR182041
|
Sensitive
|
lineage4.6.1.1
|
mw
|
SAMN02381047
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634642
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199010
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535059
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR17657997
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR17657999
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR6982000
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11775933
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1062911
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR21691015
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR176587
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR1199018
|
Other
|
lineage4.6.1.1
|
ug
|
ERR1199037
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199129
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199146
|
Sensitive
|
lineage4.6.1.1
|
so
|
ERR3078008
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR4817922
|
RR-TB
|
lineage4.6.1.1
|
gb
|
ERR1199020
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1173835
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801190
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634621
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1173361
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR1173704
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634603
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199002
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199070
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR21689689
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4816072
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR7801234
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11775924
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634619
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987741
|
Sensitive
|
lineage4.3.4.2;lineage4.6.1.1
|
None
|
SRR16089529
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358705
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR9285836
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1173834
|
Other
|
lineage4.6.1.1
|
None
|
ERR987780
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR028329
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634558
|
Other
|
lineage4.6.1.1
|
None
|
SRR12634588
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR12634600
|
Other
|
lineage4.6.1.1
|
None
|
ERR2706912
|
RR-TB
|
lineage4.3.3;lineage4.3.4.2;lineage4.6.1.1
|
cd
|
ERR1199023
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199072
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199074
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR12634553
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR1199145
|
MDR-TB
|
lineage4.6.1.1
|
ug
|
SRR12634613
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR27450173
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199077
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199085
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR987769
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199045
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR13291473
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR28409391
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7069745
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4819353
|
Sensitive
|
lineage4.6.1.1
|
gb
|
SRR19428568
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199067
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR1062927
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR16058538
|
Sensitive
|
lineage4.6.1.1
|
None
|
SAMN02567670
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634597
|
Other
|
lineage4.6.1.1
|
None
|
SRR7069652
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9125388
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1062886
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR12634566
|
Sensitive
|
lineage4.6.1.1;lineage4.6.1.2
|
None
|
ERR176553
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR484743
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049743
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR2513650
|
Other
|
lineage4.6.1.1
|
gb
|
ERR6359048
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535065
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358898
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198991
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR19406412
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199151
|
Sensitive
|
lineage4.6.1.1
|
cg
|
ERR1199014
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR553255
|
Sensitive
|
lineage4.6.1.1
|
de
|
ERR6358895
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358865
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR6358878
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR330685
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535048
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634591
|
Other
|
lineage4.6.1.1
|
None
|
SRR12634551
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR386814
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199069
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199083
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199088
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR6358891
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358887
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199006
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR11068097
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198974_ERR1198975_ERR1198976
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358838
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR1199061
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR990538
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR552565
|
Sensitive
|
lineage4.6.1.1
|
cg
|
ERR221579
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR6358861
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR12634578
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535068
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359116
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4816017
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801170
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR2100738
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR18213899
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR3275912
|
Sensitive
|
lineage4.6.1.1
|
nl
|
ERR7801286
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199080
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR3132130
|
MDR-TB
|
lineage4.6.1.1;lineage4.6.1.2
|
None
|
SRR12634587
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR553345
|
Sensitive
|
lineage4.6.1.1
|
cg
|
ERR11067995
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049723
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR1199139
|
Sensitive
|
lineage4.3.4.2;lineage4.6.1.1
|
ug
|
ERR6358710
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR038738
|
RR-TB
|
lineage4.6.1.1
|
ug
|
ERR6358982
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR161090
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR1199073
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR4820360
|
Other
|
lineage4.6.1.1
|
gb
|
ERR182057
|
Sensitive
|
lineage4.6.1.1
|
mw
|
SRR16058493
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358941
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4815017
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199141
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR4814740
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR4819048
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199035
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199041
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199058
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199082
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR19428585
|
Sensitive
|
lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1
|
None
|
SRR16089901
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358949
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358885
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987764
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR6358841
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR21690997
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4815564
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR4819077
|
Sensitive
|
lineage4.6.1.1
|
gb
|
SRR28868719
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199054
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR17657998
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11775871
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987709
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR1199025
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR182040
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR1198995
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199091
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR29440582
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11050951
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198990
|
Other
|
lineage4.6.1.1
|
ug
|
ERR1199063
|
Other
|
lineage4.6.1.1
|
ug
|
ERR1199027
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR6358847
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6358988
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR29053409
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR386996
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634576
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634641
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR552053
|
Sensitive
|
lineage4.6.1.1
|
cg
|
SRR12634596
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR16058515
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049744
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR22251546
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR28868352
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199047
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199057
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199087
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR28868768
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR30146989
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634580
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR351882
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9285879
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR12634574
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199003
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199026
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199044
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199076
|
Sensitive
|
lineage4.6.1.1
|
None
|
SAMN02567683
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199042
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199050
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199086
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199143
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199001
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199071
|
HR-TB
|
lineage4.6.1.1
|
ug
|
ERR7801192
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR16058516
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358749
|
MDR-TB
|
lineage4.6.1.1;lineage4.6.1.2
|
None
|
ERR6358868
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6358918
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR6359055
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359015
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801120
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199142
|
RR-TB
|
lineage4.6.1.1
|
ug
|
SRR7535061
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199138
|
HR-TB
|
lineage4.6.1.1
|
ug
|
ERR2516195
|
Sensitive
|
lineage4.6.1.1
|
be
|
SAMN02381037
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR7069715
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR29231780
|
RR-TB
|
lineage4.3.3;lineage4.3.4.2;lineage4.6.1.1
|
None
|
ERR2512967
|
Sensitive
|
lineage4.6.1.1
|
gb
|
SRR22251898
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198998
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR1062935
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199060
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199043
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358867
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR7535052
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR28868722
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR2517154
|
Sensitive
|
lineage4.6.1.1
|
nl
|
ERR6358869
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR1199095
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR2514484
|
Sensitive
|
lineage4.6.1.1
|
gb
|
SRR12634567
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7069115
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9285880
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR1173717
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6358948
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199021
|
Other
|
lineage4.6.1.1
|
None
|
SRR1140576
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634548
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR181981
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR6359038
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR473300
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199011
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR3470606
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634545
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199040
|
Other
|
lineage4.6.1.1
|
None
|
ERR1199125
|
HR-TB
|
lineage4.6.1.1
|
ug
|
ERR1199049
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634631
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358892
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801225
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4820159
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049724
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR126599
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR1199064
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR11775879
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801169
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1198994
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4820349
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199004
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR14519651
|
Other
|
lineage4.6.1.1
|
None
|
SRR1173564
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR2513320
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR9285817
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199000
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1198999
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR230054
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358909
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358880
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR4821147
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634544
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358875
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR990553
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535092
|
Other
|
lineage4.6.1.1
|
None
|
ERR6358893
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR10969148
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR1049591
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR6359132
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358894
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358983
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199075
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR21732657
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1140588
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR2100679
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634577
|
Sensitive
|
lineage4.6.1.1
|
None
|
SAMN02567682
|
Other
|
lineage4.6.1.1
|
ug
|
SRR1049739
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4814640
|
Sensitive
|
lineage4.6.1.1
|
gb
|
SRR1062895
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9125366
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199016
|
Other
|
lineage4.6.1.1
|
ug
|
ERR1198988
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199059
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4817761
|
Other
|
lineage4.6.1.1
|
gb
|
ERR987781
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR4596933
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR7801329
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358986
|
Other
|
lineage4.6.1.1
|
None
|
ERR6358854
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR6358870
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR3276097
|
Sensitive
|
lineage4.6.1.1
|
nl
|
ERR3470602
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR24799267
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1173182
|
Other
|
lineage4.6.1.1
|
None
|
SRR1173404
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049590
|
MDR-TB
|
lineage4.6.1.1
|
None
|
SRR12634586
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR2101220
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359023
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR553344
|
Sensitive
|
lineage4.6.1.1
|
cg
|
ERR6358839
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR1199062
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR9286054
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634632
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987749
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11775931
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1140582
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR11775919
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11775945
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR1199089
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199033
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SAMN02381021
|
HR-TB
|
lineage4.6.1.1
|
ug
|
ERR6359138
|
MDR-TB
|
lineage4.6.1.1;lineage4.7
|
None
|
ERR13291235
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR990554
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049740
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358835
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR6358901
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1140595
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR11049236
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR6358879
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR4815260
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR551718
|
Sensitive
|
lineage4.6.1.1
|
de
|
ERR7801121
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358900
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR19428598
|
Sensitive
|
lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1
|
None
|
ERR4818634
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4818866
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9285828
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987721
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR1213878
|
Sensitive
|
lineage4.1.1.3;lineage4.6.1.1
|
de
|
ERR182025
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR3132116
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR19428519
|
Sensitive
|
lineage1.1.2;lineage3.1.1;lineage4.6.1.1
|
None
|
ERR4820774
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR6359106
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987745
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR2514510
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR3275496
|
Other
|
lineage4.6.1.1
|
nl
|
SRR2101796
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535069
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR176541
|
Sensitive
|
lineage4.6.1.1
|
mw
|
ERR4816612
|
Other
|
lineage4.6.1.1
|
gb
|
ERR403325
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4814953
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6359065
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR7535046
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR9125769
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199034
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SAMEA3671546
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199005
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR9125641
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR3276029
|
Sensitive
|
lineage4.6.1.1
|
nl
|
SRR1062925
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR028335
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199131
|
MDR-TB
|
lineage4.6.1.1
|
ug
|
ERR1198989
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199007
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199022
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199017
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199048
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR6358836
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801191
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR7801224
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR2446541
|
Sensitive
|
lineage4.6.1.1
|
nl
|
SRR1140723
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR552566
|
Sensitive
|
lineage4.6.1.1
|
cg
|
SRR28868524
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987697
|
Sensitive
|
lineage4.6.1.1;lineage4.6.1.2
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SAMN02381005
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4818446
|
Sensitive
|
lineage4.6.1.1
|
gb
|
ERR11049258
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199038
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR1199068
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199024
|
Sensitive
|
lineage4.6.1.1
|
ug
|
ERR181974
|
Sensitive
|
lineage4.3.4.2.1;lineage4.6.1.1
|
mw
|
SRR29052986
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4831173
|
Sensitive
|
lineage4.6.1.1
|
de
|
ERR987720
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR987726
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR987727
|
HR-TB
|
lineage4.6.1.1
|
None
|
SAMN02381035
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR1199053
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR1049646
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR1199066
|
Sensitive
|
lineage4.6.1.1
|
ug
|
SRR27450295
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634550
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR12634599
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR4820526
|
HR-TB
|
lineage4.6.1.1
|
gb
|
ERR552316
|
Sensitive
|
lineage4.6.1.1
|
de
|
SRR2101123
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR6358902
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR16370578
|
HR-TB
|
lineage4.6.1.1
|
None
|
SRR12634604
|
Other
|
lineage4.6.1.1
|
None
|
ERR6358866
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR2503429
|
Sensitive
|
lineage4.6.1.1
|
fi
|
ERR987738
|
HR-TB
|
lineage4.6.1.1
|
None
|
ERR990537
|
Sensitive
|
lineage4.6.1.1
|
None
|