EBG00000313339 - n.2537A>T
Drug resistance types
16 Sensitive
13 RR-TB
12 HR-TB
4 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
117 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 16 |
| lineage3 | 25 |
| lineage4.3.3 | 11 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 24 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1 | 18 |
| lineage1.2.2 | 1 |
| lineage4.8 | 18 |
| lineage4.4.2 | 3 |
| lineage4 | 5 |
| lineage4.1.3 | 1 |
| lineage4.5 | 3 |
| lineage4.6.5 | 1 |
| lineage4.1 | 2 |
| lineage4.2.1 | 2 |
| 7 | |
| lineage5 | 1 |
| lineage3.1.1 | 4 |
| lineage4.7 | 1 |
| lineage1.1.2 | 4 |
| lineage4.6.2.2 | 6 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.3.2 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 173 |
Geographic prevalence
Country level data for this variant is available for 43 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR017777 | Pre-XDR-TB | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | ERR4798130 | Pre-XDR-TB | lineage3 | in | ERR10796564 | Other | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172282 | Other | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815165 | Other | lineage4.1.2.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | ERR4815104 | Other | lineage4.8 | None | ERR4815268 | Other | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR3085299 | Pre-XDR-TB | lineage4 | None | ERR4814362 | Other | lineage4.8 | None | SRR3086370 | Pre-XDR-TB | lineage4 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815655 | Other | lineage4.1.2 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4815467 | Other | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | ERR4816232 | Other | lineage4 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816183 | Other | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4815053 | Other | lineage4.1.2.1 | gb | ERR4817309 | Other | lineage4.5 | gb | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815919 | Other | lineage4.8 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816650 | Sensitive | lineage4.1.2.1 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4817175 | Other | lineage4.8 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816696 | Other | lineage3 | None | ERR4816691 | Other | lineage4.1.2.1 | gb | ERR4816690 | Other | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817710 | Other | lineage1.1.2 | None | ERR4816804 | Other | lineage4.1 | None | ERR4817439 | Other | lineage4.6.2.2 | gb | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817290 | Other | lineage3 | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4817874 | Other | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818685 | Other | lineage4.6.2.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818752 | Other | lineage3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4819087 | Other | lineage4.3.3 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818064 | Other | lineage4.8 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818190 | Other | lineage4.8 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR2513298 | Other | lineage4.8 | gb | ERR4818918 | Other | lineage1.1.2 | gb | ERR4818407 | Other | lineage4.3.2 | None | ERR4818449 | Other | lineage4.3.3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | ERR4817563 | Other | lineage4.1.2.1 | gb | ERR4819133 | Other | lineage1.2.2.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR2513975 | Other | lineage3 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR2513910 | Other | lineage3 | gb | ERR2514261 | Other | lineage3 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4819547 | HR-TB | lineage2.2.1 | gb | ERR4819567 | Other | lineage2.2.1 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819561 | Sensitive | lineage4.1.2.1 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR4819630 | Other | lineage4.8 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4820891 | Other | lineage4.9 | gb | ERR2514949 | Sensitive | lineage3 | gb | ERR4819824 | Sensitive | lineage4.4.2 | gb | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4819982 | RR-TB | lineage2.2.1 | None | ERR4820833 | HR-TB | None | ERR2514968 | Other | lineage4.3.3 | None | ERR2515032 | Other | lineage3 | None | ERR4821775 | Other | lineage4 | None | ERR2515077 | Sensitive | lineage3 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821917 | Sensitive | lineage1.1.3.2 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR4821105 | Other | lineage3.1.2 | gb | ERR4821214 | RR-TB | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821712 | HR-TB | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821584 | Other | lineage4.8.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | SRR5818434 | Sensitive | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR6397642 | RR-TB | None | SRR5818464 | Other | lineage4.9 | None | SRR5818683 | Sensitive | lineage3.1.1 | dj | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829835 | HR-TB | lineage4.8 | it |
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