EBG00000313339 - n.2806C>A


Drug resistance types
54 Sensitive 6 RR-TB 18 HR-TB 21 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 34 Other
lineage Counts
lineage Count
lineage2.2.1.1 5
3
lineage2.2.2 5
lineage4.8 5
lineage4.9 18
lineage2.2.1 21
lineage3.1.2.1 3
lineage4.1.2.1 1
lineage4 3
lineage1.1.2 9
lineage3.1.1 3
lineage4.6.2.2 2
lineage4.2.2 2
lineage3 11
lineage4.1.1 1
lineage4.8;lineage3 1
lineage4.1.1.3 1
lineage4.4.2 1
lineage4.3.3 6
La1.8.1 13
lineage4.6.1 1
lineage4.6.1.1 3
lineage4.6.1.2 1
lineage4.4.1.1 3
lineage4.2.1.1 1
lineage4.2.1;lineage2.2.1 1
lineage4.2.1 1
La1 1
lineage4.9;La1.8 1
lineage4.3.2 2
La1.2 1
lineage2.2 4
lineage4.1.2.1.1 1
lineage4.1.1.3.1 1
lineage4.9;lineage2.2.1 2
lineage4.3.2.1 2
lineage4.4.1.1.1 1
lineage1.1.3 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 143
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1633962 Sensitive lineage2.2.1.1 None
SRR3105762 HR-TB None
SRR6280216 RR-TB lineage2.2.2 cn
SRR6074059 Sensitive lineage4.8 None
SRR3675219 Other lineage4.9 None
SAMN02403473 Pre-XDR-TB lineage2.2.2 None
SRR6280270 Sensitive lineage2.2.1 cn
SRR6280199 Sensitive lineage2.2.1 cn
SAMN02599156 HR-TB lineage3.1.2.1 None
SRR3743190 Sensitive lineage4.1.2.1 None
SRR6280308 Sensitive lineage2.2.1 cn
SRR3675589 Sensitive lineage4 None
SRR3742667 Sensitive lineage4.9 None
SAMN02599179 MDR-TB lineage1.1.2 None
ERR2245292 HR-TB lineage3.1.1 no
ERR2245343 Sensitive lineage3.1.1 no
ERR2510790 Other lineage4.6.2.2 None
ERR2245344 Sensitive lineage3.1.1 no
SRR1723829 Sensitive lineage2.2.1 None
SRR7898217 MDR-TB lineage1.1.2 None
SRR5152926 MDR-TB lineage2.2.1 None
SRR5152904 Other lineage2.2.1 None
SRR6044769 Other lineage1.1.2 None
ERR2179740 Sensitive lineage4.2.2 cn
SRR6280150 Sensitive lineage2.2.1 cn
SRR6280271 Sensitive lineage2.2.1 cn
SRR6280286 Sensitive lineage2.2.1 None
SAMN02599075 Sensitive lineage1.1.2 None
SRR6046127 Sensitive lineage3 None
SRR6044916 Other lineage4.1.1 None
SRR6046219 Other lineage4.8;lineage3 gb
SRR6045379 Other None
SRR6046442 Other lineage3 None
SRR6280272 Sensitive lineage2.2.1 cn
SRR6046558 Other lineage3 gb
ERR279657 Sensitive lineage2.2.1.1 None
SRR6280312 Sensitive lineage2.2.1.1 cn
SRR6824572 MDR-TB lineage2.2.1 None
SRR6896352 Sensitive lineage4.1.1.3 None
SRR6824423 Sensitive lineage4.4.2 None
SRR6855793 Sensitive lineage2.2.1 None
ERR495188 Sensitive lineage2.2.1.1 None
SRR7131121 Other lineage4.3.3 None
ERR5087594 Other La1.8.1 None
ERR5162122 HR-TB lineage4.9 None
SRR7131004 Other lineage4.6.2.2 None
SRR7535053 Sensitive lineage3 None
SRR7535074 Sensitive lineage3 None
SRR7535054 Sensitive lineage4.6.1 None
SRR7535073 Sensitive lineage4.6.1.1 None
SRR7535081 Sensitive lineage4.6.1.1 None
SRR7535077 MDR-TB lineage4.6.1.2 None
SRR7535079 Sensitive lineage4.6.1.1 None
SRR7535082 Sensitive lineage4 None
SRR7535080 HR-TB lineage4.8 None
ERR10796575 RR-TB lineage4.9 None
SRR7645856 Sensitive lineage4.4.1.1 None
SRR7646056 Other lineage4.2.1.1 None
SRR7755705 MDR-TB lineage4.2.1;lineage2.2.1 None
ERR037235 Sensitive lineage4.9 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR7646073 MDR-TB lineage4.2.1 None
ERR3468601 HR-TB La1.8.1 None
ERR3439439 Other La1.8.1 None
ERR3439522 Other La1.8.1 None
ERR3468584 Sensitive lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR3468551 HR-TB La1.8.1 None
ERR3468577 HR-TB La1 None
ERR3468612 Other La1.8.1 None
ERR3468659 Other lineage4.9 None
ERR3468619 HR-TB lineage4.9;La1.8 None
ERR3468653 Other lineage4.9 None
ERR4188208 Other La1.8.1 None
ERR3468683 Other La1.8.1 None
ERR3470663 Sensitive lineage3 None
ERR4178291 Sensitive lineage4.3.2 None
ERR4188189 Other La1.8.1 None
ERR4188204 Other La1.8.1 None
ERR4188223 Other La1.8.1 None
ERR4188215 Other La1.8.1 None
ERR4596906 Sensitive lineage1.1.2 None
ERR4188278 Other La1.8.1 None
ERR4195308 Sensitive lineage4.3.3 None
ERR4596937 Sensitive lineage1.1.2 None
ERR4769478 Other La1.2 None
ERR4812553 Sensitive lineage4.3.3 pe
ERR5865066 MDR-TB lineage4.8 None
ERR5865065 MDR-TB lineage4.8 None
ERR5979445 Sensitive lineage3 None
SRR1013528 Pre-XDR-TB lineage2.2 None
ERR6865895 Sensitive lineage4.3.2 None
SRR1013527 RR-TB lineage2.2 None
ERR760878 MDR-TB lineage4.1.2.1.1 ar
ERR7737736 MDR-TB lineage2.2.1 None
ERR9117723 Other lineage4.1.1.3.1 None
ERR9121274 Sensitive lineage4.3.3 None
SRR1013530 HR-TB lineage4.9 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR1013531 MDR-TB lineage4.9 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062868 HR-TB lineage4.9 None
SRR1062865 HR-TB lineage2.2.2 None
SRR10869015 Sensitive lineage4.8 None
SRR1062869 Pre-XDR-TB lineage4.9 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR10869306 Sensitive lineage2.2.1.1 None
SRR10869323 HR-TB lineage4.3.2.1 None
SRR1106670 Other lineage4.9 None
SRR1165236 Pre-XDR-TB lineage2.2 None
SRR11349174 MDR-TB lineage4.4.1.1.1 None
SRR11349179 MDR-TB lineage2.2.1 None
SRR1141261 MDR-TB lineage4.9 None
SRR1167264 Pre-XDR-TB lineage2.2 None
SRR1172722 Sensitive lineage1.1.2 None
SRR1173174 Pre-XDR-TB lineage2.2.2 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR1173013 Sensitive lineage1.1.2 None
SRR1173036 Sensitive lineage1.1.3 None
SRR1173055 MDR-TB lineage2.2.1 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR1172943 HR-TB lineage3 None
SRR1173801 Other lineage3 None
SRR1173377 Pre-XDR-TB lineage2.2.2 None
SRR1173686 MDR-TB lineage3 None
SRR1175173 HR-TB lineage3.1.2.1 None
SRR1175132 HR-TB lineage3 None
SRR1181051 MDR-TB lineage4.4.1.1 None
SRR16156814 Sensitive lineage4.9 None
SRR14782555 Pre-XDR-TB lineage2.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR16156291 Other lineage4.9 None
SRR18511602 Sensitive lineage4.2.2 None
SRR16157045 Sensitive lineage4.9 None
SRR1791910 Other None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18391658 Other La1.7.1 None
SRR18002949 Sensitive lineage2.2.1 None
SRR21240197 Sensitive lineage4.3.3 None
SRR21595927 HR-TB lineage2.2.1 None
SRR8692897 Other lineage4.9 None