EBG00000313339 - n.2806C>A
Drug resistance types
41 Sensitive
1 RR-TB
4 HR-TB
18 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.9 | 14 |
| lineage3 | 6 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.1 | 15 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage1.1.2 | 7 |
| lineage4.4.2 | 1 |
| lineage2.2.2 | 6 |
| lineage4.1 | 1 |
| lineage4.2.2 | 2 |
| lineage4.6.1.1 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.9.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.3.2 | 2 |
| La1.2 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7755705 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR1013531 | Sensitive | lineage4.9 | None | ERR3470663 | Sensitive | lineage3 | None | ERR760878 | MDR-TB | lineage4.1.2.1.1 | ar | SRR6280286 | Sensitive | lineage2.2.1 | None | SRR6280312 | Sensitive | lineage2.2.1.1 | cn | ERR5865065 | MDR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | SRR7070609 | Other | lineage4.2.2.2 | None | SRR1062868 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR16156814 | Sensitive | lineage4.9 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR12420692 | MDR-TB | lineage2.2.1 | None | SRR6824423 | Sensitive | lineage4.4.2 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR10869306 | Sensitive | lineage2.2.1.1 | None | SRR6855793 | Sensitive | lineage2.2.1 | None | SRR1167264 | Pre-XDR-TB | lineage2.2.2 | None | SRR3105762 | Sensitive | lineage4.1 | None | SRR18511602 | Sensitive | lineage4.2.2 | None | SRR7535082 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR7535054 | Sensitive | lineage4.6.1.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869323 | HR-TB | lineage4.3.2.1 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172722 | Sensitive | lineage1.1.2 | None | SRR1141261 | Sensitive | lineage4.9 | None | SRR7755733 | MDR-TB | lineage4.3.3 | None | SRR1165236 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013530 | Other | lineage4.9.1 | None | SRR7535080 | Sensitive | lineage4.8 | None | SRR1238557 | Other | lineage4.9 | None | SRR21240197 | Sensitive | lineage4.3.3 | None | SRR7646073 | MDR-TB | lineage4.2.1 | None | SRR1062865 | Sensitive | lineage2.2.2 | None | SRR1106670 | Sensitive | lineage4.9 | None | ERR2179740 | Sensitive | lineage4.2.2 | cn | SRR1062864 | Sensitive | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | ERR037235 | Sensitive | lineage4.9 | None | SRR6280150 | Sensitive | lineage2.2.1 | cn | SRR6046442 | Other | lineage3 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | SRR7535074 | Sensitive | lineage3 | None | ERR4178291 | Sensitive | lineage4.3.2 | None | SRR6280216 | RR-TB | lineage2.2.2 | cn | SRR6280270 | Sensitive | lineage2.2.1 | cn | ERR7737736 | MDR-TB | lineage2.2.1 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | ERR4769478 | Other | La1.2 | None | SAMN02599179 | MDR-TB | lineage1.1.2 | None | ERR4188208 | Sensitive | La1.8.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | SRR7898217 | MDR-TB | lineage1.1.2 | None | SRR1723829 | Sensitive | lineage2.2.1 | None | SRR12420668 | MDR-TB | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR5152904 | Other | lineage2.2.1 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | ERR5979445 | Sensitive | lineage3 | None | SRR1013527 | Other | lineage2.2.1 | None | SAMN02599075 | Sensitive | lineage1.1.2 | None | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | ERR6865895 | Sensitive | lineage4.3.2 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR14782555 | Other | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR11349174 | MDR-TB | lineage4.4.1.1.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR638895 | Sensitive | lineage4.9 | None | SRR1173377 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SRR1013532 | Sensitive | lineage4.3.2;lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | SRR16156291 | Sensitive | lineage4.9 | None | SRR1062869 | Sensitive | lineage4.9.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | ERR5865066 | MDR-TB | lineage4.8 | None |
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