Rv1630 - c.969C>T
Drug resistance types
3 Sensitive
2 RR-TB
14 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| lineage1.1.2 | 1 |
| lineage3 | 2 |
| lineage2.2.1 | 5 |
| lineage1.2.2.2 | 2 |
| lineage3.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9;lineage6.3 | 1 |
| 5 | |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La3 | 2 |
| lineage4.1.2 | 1 |
| lineage2.1;lineage4.9 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| M.canetti;lineage1 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 62 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173633 | Other | lineage4.9 | None | ERR7902584 | HR-TB | lineage1.1.2 | None | SRR17832802 | HR-TB | lineage3 | None | ERR502912 | Other | lineage2.2.1 | None | ERR2515360 | Sensitive | lineage1.2.2.2 | za | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196546 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR987722 | MDR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR1173118 | Other | lineage2.2.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | SRR6982428 | Sensitive | lineage1.2.2.2 | None | SRR1172728 | RR-TB | La3 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1173778 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6789621 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR1172951 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3416776 | Other | lineage2.1 | None | ERR4407452 | Other | lineage3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR1196583 | Other | lineage4.9 | None | ERR11049858 | Sensitive | lineage6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1196677 | Other | lineage2.2 | None |
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