lineage | Count |
---|---|
lineage1.2.2.2 | 2 |
lineage3 | 2 |
32 | |
lineage1.1.2 | 1 |
lineage6.1.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.9 | 7 |
lineage4 | 4 |
lineage4.3.3 | 2 |
lineage3.1 | 2 |
lineage2.2.1 | 5 |
lineage2 | 2 |
lineage2.1 | 2 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 67 |
ID | Drug resistance | Lineage | Country iso2 | SRR6982428 | Sensitive | lineage1.2.2.2 | None | ERR4407452 | Sensitive | lineage3 | None | ERR4811022 | HR-TB | None | ERR2515360 | Sensitive | lineage1.2.2.2 | za | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | SRR1172728 | MDR-TB | None | ERR7902584 | HR-TB | lineage1.1.2 | None | ERR11049858 | Sensitive | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1196494 | MDR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR11871415 | MDR-TB | lineage2.2.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR18003019 | Other | lineage2.2.1 | None | SRR13837788 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR12416824 | HR-TB | None | SRR13837691 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR1710057 | Other | lineage2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR3416776 | Other | lineage2.1 | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4818394 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None |
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