lineage | Count |
---|---|
lineage4.9 | 26 |
lineage2.2 | 4 |
La2;lineage2.2 | 1 |
lineage2.2.1 | 2 |
La1.2;La1.8.1 | 1 |
M.canetti;lineage1 | 1 |
lineage4.9;lineage7 | 2 |
La3;lineage4.9 | 1 |
La1.7.1;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.4.1.2 | 1 |
lineage4 | 1 |
La1.7;lineage4.9 | 3 |
La1;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage1.1.3.1 | 1 |
lineage4.8 | 1 |
La2;lineage4.9 | 1 |
La3;lineage4.3.4 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage2.2.1.2;lineage7 | 1 |
spoligotype | Count |
---|---|
None | 53 |
ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR3797029 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR6359082 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR1063858 | HR-TB | lineage4.9 | None |
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