Rv1854c - c.642T>C


Drug resistance types
14 Sensitive 1 RR-TB 62 HR-TB 4 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 37 Other
lineage Counts
lineage Count
lineage2.2.1 5
73
lineage7;lineage2.2.1.2 1
lineage4.9 6
lineage2.2 4
lineage4.3.4 1
lineage4.1.2.1 1
lineage4.1 1
lineage4.2.1 2
lineage4 4
lineage4.8 5
lineage4.3.3 2
lineage3 3
lineage3.1.1 2
lineage4.7 1
lineage4.2.2.2 1
lineage4.1.1 1
lineage1.2.2.2 1
lineage1.2.1.2.1 1
lineage3.1.2.1 1
La1 2
lineage4.1.3 2
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 121
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969731 Other lineage2.2.1 None
SRR15368973 Other None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR14782405 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR3675488 HR-TB None
SRR3675465 HR-TB None
ERR158583 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR4814437 Other lineage4.1.2.1 None
ERR4814841 Other lineage4.1 None
ERR4815394 RR-TB lineage4.2.1 None
SRR3675486 HR-TB None
ERR4815399 Sensitive lineage4.2.1 gb
ERR181744 HR-TB None
SRR3675234 Other None
SRR3675270 HR-TB None
SRR3675280 HR-TB lineage4.9 None
SRR3675311 Other None
ERR2229578 Sensitive lineage4 None
ERR2228921 Sensitive lineage4.8 dk
SRR3675550 Other None
ERR212034 HR-TB None
SRR3732645 MDR-TB lineage4.3.3 None
SRR3675555 HR-TB None
ERR2229137 Sensitive lineage4.8 None
ERR212123 Other None
SRR3675574 HR-TB None
ERR4816466 HR-TB None
SRR3732718 MDR-TB lineage4.3.3 None
ERR4817489 Other lineage3 None
ERR2229373 Sensitive lineage4.8 dk
ERR2229487 Sensitive lineage4.8 None
ERR2229429 HR-TB lineage4.8 None
ERR2245334 Sensitive lineage3.1.1 None
ERR2245286 HR-TB lineage3.1.1 None
ERR4817987 Other lineage4.7 None
ERR2513054 Other lineage4.2.2.2 None
ERR2513642 Sensitive lineage4.1.1 None
ERR2512460 Other lineage1.2.2.2 gb
ERR2514125 Other lineage3 None
SRR5341418 Other None
ERR2514540 Other lineage3 gb
SRR5341313 HR-TB None
ERR4819786 Sensitive lineage2.2.1 None
ERR2693231 Other None
SRR6045526 HR-TB None
ERR4821823 Sensitive lineage1.2.1.2.1 None
ERR2693254 Other None
ERR2693230 Other None
ERR2693257 Other None
SRR6044790 HR-TB None
SRR5535933 HR-TB None
SRR6045233 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6045053 Other None
SRR6046046 Other None
SRR6045327 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6045399 Other None
SRR6046225 HR-TB None
SRR6046362 HR-TB None
SRR6325444 HR-TB None
SRR6046460 HR-TB None
SRR6046644 HR-TB None
SRR6046824 HR-TB None
SRR6325448 HR-TB None
ERR4831117 HR-TB None
ERR5311099 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
SRR6797358 Other lineage3.1.2.1 None
ERR502889 Other None
ERR1034652 Other None
ERR1063859 HR-TB None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283021 HR-TB None
ERR133986 HR-TB None
ERR3283017 HR-TB None
ERR133825 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR3283032 HR-TB None
ERR3283024 Other None
ERR3797024 Other lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3439432 Other None
ERR3797047 HR-TB lineage4 None
ERR3797014 Other None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797046 HR-TB None
ERR3797044 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR3797061 Other None
ERR4810741 HR-TB None
ERR387051 HR-TB None
ERR4407463 HR-TB None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4811493 HR-TB None
ERR4811105 HR-TB None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR6336805 Sensitive lineage1.2.1.2 None
ERR736839 Other None
ERR6358991 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
SRR11972332 HR-TB lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR11972446 MDR-TB lineage2.2.1 None
SRR12416824 HR-TB None
SRR12142341 HR-TB None