lineage | Count |
---|---|
lineage4.9 | 5 |
lineage4;lineage1.1.2 | 1 |
lineage4.1 | 2 |
lineage2.2.1 | 1 |
62 | |
lineage4.5 | 1 |
lineage4 | 6 |
lineage4.1.2.1 | 3 |
lineage3.1 | 2 |
La2 | 1 |
La1.3 | 1 |
La1.2 | 1 |
lineage2.2 | 2 |
lineage3.1.2 | 1 |
lineage4.1.2.1.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage3;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5341313 | HR-TB | None | ERR752174 | Sensitive | lineage4.5 | th | SRR5535933 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5341456 | Other | None | SRR5341470 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045399 | Other | None | SRR6325444 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046492 | Other | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | ERR294248 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323039 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR4769552 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358837 | HR-TB | None | ERR736848 | HR-TB | None | ERR9119669 | HR-TB | None | ERR736865 | HR-TB | None | ERR8976043 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR987722 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR6325445 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675545 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675571 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None |
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