EBG00000313325 - n.1042G>C
Drug resistance types
82 Sensitive
11 RR-TB
12 HR-TB
17 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 20 |
| lineage2.2 | 3 |
| 4 | |
| lineage1.1.3.2 | 1 |
| lineage4.7 | 1 |
| lineage4.4.1.1 | 5 |
| La1.2.BCG | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.1.2.1 | 9 |
| lineage3 | 13 |
| lineage4.6 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 11 |
| lineage4.9 | 57 |
| lineage4.8 | 5 |
| lineage1.2.1.2.1 | 2 |
| lineage1.2.2.2 | 5 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| La1.8.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4 | 6 |
| lineage4.1.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.6.1 | 3 |
| lineage4.3.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2.2 | 2 |
| lineage4.3.4 | 1 |
| lineage3.1.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage1.1.2 | 2 |
| La1.8.2 | 1 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage3;lineage2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 185 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1577252 | HR-TB | lineage2.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3105762 | HR-TB | None | ERR4814573 | Other | lineage1.1.3.2 | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR464760 | Sensitive | lineage4.4.1.1 | ch | ERR4816167 | Other | La1.2.BCG | gb | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR192070 | Other | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR4817076 | Sensitive | lineage3 | None | ERR2510807 | Other | lineage4.6 | None | ERR1034791 | RR-TB | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4816755 | Other | lineage4.1.1.3 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR2510757 | HR-TB | lineage4.3.3 | it | SRR3742667 | Sensitive | lineage4.9 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | ERR2510820 | Other | lineage4.8 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR245790 | Sensitive | None | ERR2513628 | Other | lineage4.1.2.1 | None | ERR4818575 | Sensitive | lineage4.1.2.1 | gb | ERR2512848 | Sensitive | lineage1.2.1.2.1 | gb | SRR5341346 | Sensitive | lineage3 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR464762 | Sensitive | lineage4.4.1.1 | ch | SAMN02599061 | MDR-TB | lineage3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820650 | Sensitive | lineage2.2.1 | None | ERR4820858 | Sensitive | lineage4.2.2.2 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR4829264 | Sensitive | lineage4.8 | None | SRR6045162 | Sensitive | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR5382721 | Other | La1.8.1 | None | SRR6046106 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045764 | Sensitive | lineage4.9 | None | SRR6045014 | Sensitive | lineage4.9 | None | ERR4829120 | MDR-TB | lineage4.8 | it | ERR4829196 | Other | lineage4.1.2 | None | ERR4828747 | Sensitive | lineage2.2.1 | None | ERR4829336 | Other | lineage4 | None | ERR464729 | MDR-TB | lineage4.4.1.1 | ch | SRR6046815 | Other | lineage3 | None | ERR4828997 | Sensitive | lineage4.1.2.1 | None | ERR4828803 | Sensitive | lineage4.1.2.1 | None | ERR4828811 | Other | lineage4.1.1 | None | ERR4830479 | RR-TB | lineage1.2.2.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR6896576 | Other | lineage2.2.1 | None | ERR5311095 | Other | La1.8.1 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR7131018 | Sensitive | lineage4.3.1 | None | SRR7131035 | Sensitive | lineage4.8 | None | ERR4831631 | HR-TB | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6855734 | Sensitive | lineage4.3.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | ERR5162126 | Sensitive | lineage4.9 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7131154 | HR-TB | lineage4.3.3 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796559 | Other | lineage4.9 | None | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283015 | Sensitive | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3468653 | Other | lineage4.9 | None | ERR3439294 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR3468789 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR405191 | Other | lineage4.9 | None | ERR3797084 | Sensitive | lineage4.9 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR5979802 | Sensitive | lineage4.9 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR5979799 | Sensitive | lineage4.9 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | ERR5979784 | Sensitive | lineage4.9 | None | ERR5979809 | Sensitive | lineage4.9 | None | ERR5979826 | Sensitive | lineage4.9 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR5979815 | Sensitive | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | ERR5979822 | Sensitive | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6359073 | Sensitive | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751414 | MDR-TB | lineage4 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR9119098 | Sensitive | lineage4.3.3 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | SRR1062868 | HR-TB | lineage4.9 | None | ERR9786392 | Sensitive | lineage4.3.4.1 | None | SRR10305656 | Other | lineage2.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR10869138 | Sensitive | lineage2.2.1 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1106670 | Other | lineage4.9 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140677 | MDR-TB | lineage4.6.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173045 | Sensitive | lineage3 | None | SRR1173367 | MDR-TB | lineage3 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1175053 | Other | lineage1.2.1.2.1 | None | SRR1175108 | Other | lineage3.1.2 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR12199399 | HR-TB | lineage1.1.1 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR21240197 | Sensitive | lineage4.3.3 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR16156814 | Sensitive | lineage4.9 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR16100231 | Sensitive | lineage4 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR19303773 | Other | lineage4.6.2.2 | None |
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