EBG00000313325 - n.1359C>T
Drug resistance types
26 Sensitive
4 RR-TB
12 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| 2 | |
| lineage4.4.1.1 | 2 |
| lineage4.6.2.2 | 6 |
| lineage2.2.1 | 6 |
| lineage3 | 10 |
| La1.2.BCG | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 2 |
| lineage3.1.3 | 2 |
| lineage4.9 | 12 |
| lineage4.4.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.8 | 2 |
| lineage4 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.6.1.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9.1 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3105762 | HR-TB | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4816632 | Sensitive | lineage2.2.1 | None | ERR4816103 | Sensitive | lineage3 | gb | ERR1034791 | RR-TB | None | ERR4818509 | RR-TB | La1.2.BCG | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4817709 | HR-TB | lineage4.6.2.2 | gb | ERR2513589 | Other | lineage3.1.3 | None | ERR4818877 | Other | lineage3 | gb | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4820748 | Other | lineage3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | SRR6045450 | Other | lineage4.9 | None | ERR2179699 | Other | lineage4.4.2 | cn | ERR4821263 | Other | lineage4.1.3 | gb | ERR502942 | Sensitive | lineage4.9 | None | SRR6257038 | HR-TB | lineage4.1 | None | ERR4821586 | Sensitive | lineage4.3.1.1 | gb | ERR4822239 | Sensitive | lineage4.6.2.2 | gb | ERR4821676 | HR-TB | lineage4.8 | None | SRR6046208 | Other | lineage4 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | DRR189052 | Other | lineage4.1.2 | None | ERR126611 | Sensitive | lineage4.9.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR4797706 | Sensitive | lineage3.1.3 | in | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR5979787 | Other | lineage4.9 | None | ERR6197025 | Other | lineage4.7 | None | ERR5979817 | Sensitive | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1002681 | HR-TB | lineage4.1 | None | SRR1172911 | Sensitive | lineage3 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173055 | MDR-TB | lineage2.2.1 | None | SRR1173632 | RR-TB | lineage2.2.1 | None | SRR1175132 | HR-TB | lineage3 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR1792247 | Other | La1.7.1 | None |
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