EBG00000313339 - n.1090C>A
Drug resistance types
46 Sensitive
3 RR-TB
4 HR-TB
14 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 19 |
| lineage4.1.2.1 | 6 |
| lineage4.1.4 | 1 |
| La1.8.1 | 9 |
| lineage4.9;La1.8 | 1 |
| lineage6.1.1 | 1 |
| lineage4.9 | 13 |
| La1.2 | 2 |
| La1.3 | 1 |
| lineage2.2 | 2 |
| lineage4.8 | 6 |
| lineage4.6.1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage3 | 3 |
| lineage2.2.2 | 1 |
| 4 | |
| lineage3.1.2 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.3.2.1 | 4 |
| lineage4.1.1 | 6 |
| lineage4.3.3 | 5 |
| lineage1.1.3.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4 | 2 |
| lineage3.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.7 | 2 |
| lineage4.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4188253 | Other | La1.8.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4627379 | Other | La1.8.1 | None | ERR4192413 | Other | lineage6.1.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR4627392 | Other | La1.8.1 | None | ERR4769503 | Other | La1.2 | None | ERR4769546 | Other | La1.3 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR5865338 | MDR-TB | lineage2.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR6359004 | MDR-TB | lineage4.6.1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10482944 | Other | La1.8.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR13199734 | Other | La1.2 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR11972383 | Sensitive | lineage1.1.2 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR19576436 | Sensitive | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR2101651 | Sensitive | lineage4.3.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21764250 | Other | lineage4.9 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR2179857 | RR-TB | lineage4 | None | ERR4814964 | Sensitive | lineage3.1.2.1 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045614 | Other | lineage4.8 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046189 | Other | lineage4.8 | None | SRR6044857 | Other | lineage4.8.1 | gb | SRR6045138 | Other | lineage3.1.1 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | ERR502493 | Sensitive | lineage4.9 | None | SRR6046607 | Other | lineage3 | None | SRR6046655 | Other | lineage4.1.2.1 | None | ERR2843513 | Other | lineage2.2.1;lineage1.1.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6046891 | Other | lineage4.7 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982196 | Sensitive | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982394 | Sensitive | lineage4.3.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | None | ERR5162118 | Other | La1.8.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | ERR5311080 | Other | La1.8.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | ERR5162133 | Other | La1.8.1 | None | SRR833161 | Sensitive | None | SRR7131195 | Other | lineage2.2.1 | None |
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