EBG00000313339 - n.1090C>A


Drug resistance types
46 Sensitive 3 RR-TB 4 HR-TB 14 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 51 Other
lineage Counts
lineage Count
lineage3 3
La1.8.1 9
lineage4.4.1.1 3
lineage4.1.2.1 6
lineage3.1.2 2
lineage2.2.2 1
lineage2.2.1 19
lineage4.1.1.3 2
lineage4.3.3 5
lineage4.1.1 6
lineage1.1.3.2 2
lineage4.8 6
lineage4.3.4.1 2
4
lineage4 2
lineage4.9 13
lineage1.2.2.2 2
lineage3.1.2.1 1
lineage3.1.3 1
lineage4.3.2.1 4
lineage3.1.1 3
lineage3.1.2.2 1
lineage1.1.3.3 1
lineage4.7 2
lineage2.2.1;lineage1.1.1 1
lineage4.6.2.2 1
lineage4.3.4.2.1 1
lineage4.4 1
lineage4;lineage2.2.1 1
lineage4.1.2 1
lineage2.2 2
lineage4.3.4.2 1
lineage4.9;La1.8 1
lineage4.1.4 1
La1.2 2
lineage6.1.1 1
La1.3 1
lineage4.6.1.2 1
lineage2.1 1
lineage2.2.1.1 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 119
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR17856664 Sensitive lineage3 None
SRR1791899 HR-TB La1.8.1 None
SRR19304083 Other lineage4.4.1.1 None
SRR18149455 Sensitive lineage4.1.2.1 None
SRR18213800 Other lineage3.1.2 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002954 Other lineage2.2.1 None
SRR18149430 Sensitive lineage4.1.1.3 None
SRR18911000 Sensitive lineage2.2.1 None
SRR19304095 Other lineage4.1.2.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101617 Other lineage4.1.1 None
SRR2101663 Other lineage1.1.3.2 None
SRR2101681 Sensitive lineage4.8 None
SRR2101689 Other lineage4.3.4.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR19576436 Sensitive None
SRR2101803 Sensitive lineage4.3.3 None
SRR21676318 Sensitive lineage2.2.1 None
ERR2179857 RR-TB lineage4 None
SRR21764250 Other lineage4.9 None
SRR3105736 Other lineage1.2.2.2 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR4814964 Sensitive lineage3.1.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR2101651 Sensitive lineage4.3.2.1 None
SRR6045464 Other lineage4.1.1.3 None
SRR6045516 Other lineage3.1.1 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045743 Other lineage3 None
SRR6044838 Other lineage4.9 None
SRR6045614 Other lineage4.8 None
SRR6045683 Other lineage3.1.2 None
SRR6045205 Sensitive lineage4.9 None
SRR6045138 Other lineage3.1.1 None
SRR6046189 Other lineage4.8 None
SRR6046655 Other lineage4.1.2.1 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046607 Other lineage3 None
SRR6046891 Other lineage4.7 None
ERR2843513 Other lineage2.2.1;lineage1.1.1 None
ERR502472 Other lineage4.6.2.2 None
SRR6856087 Sensitive lineage4 None
ERR502482 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
SRR6982102 Other lineage2.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982106 Sensitive lineage4.8 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982229 Sensitive lineage2.2.1 None
SRR6982196 Sensitive None
SRR6982195 RR-TB lineage4.4 None
SRR6982227 Other lineage4.1.1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6981993 Other lineage4.3.2.1 None
SRR6981981 Other lineage4.3.3 None
SRR6981983 Sensitive lineage3.1.1 None
SRR6982011 Other lineage4.1.1 None
SRR6982014 Other lineage4.1.1 None
SRR6982076 Sensitive lineage4.9 None
SRR6855915 Sensitive lineage4.9 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6982394 Sensitive lineage4.3.2.1 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982405 Sensitive None
SRR6856032 Sensitive lineage2.2.1 None
SRR6982077 MDR-TB lineage4.3.2.1 None
SRR833161 Sensitive None
ERR5162118 Other La1.8.1 None
ERR5162133 Other La1.8.1 None
SRR7131195 Other lineage2.2.1 None
ERR5311080 Other La1.8.1 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6982558 Other lineage4.3.4.2 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4188010 Other La1.8.1 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324351 MDR-TB lineage4.1.4 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR3324373 MDR-TB lineage2.2.1 None
ERR3335798 MDR-TB lineage2.2.1 None
ERR4188253 Other La1.8.1 None
ERR4769503 Other La1.2 None
ERR4192413 Other lineage6.1.1 None
ERR4627379 Other La1.8.1 None
ERR4627392 Other La1.8.1 None
ERR4769419 Other lineage4.9 None
ERR4769507 Sensitive lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR4769546 Other La1.3 None
ERR6866186 Sensitive lineage4.8 None
ERR5865338 MDR-TB lineage2.2 None
ERR6359004 MDR-TB lineage4.6.1.2 None
ERR9117806 Other lineage4.8 None
SRR11662417 Pre-XDR-TB lineage2.1 None
ERR8025347 Sensitive lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR10482944 Other La1.8.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR11972383 Sensitive lineage1.1.2 None
SRR13199734 Other La1.2 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR13423641 MDR-TB lineage2.2.1 None