EBG00000313339 - n.1518G>A
Drug resistance types
67 Sensitive
3 RR-TB
7 HR-TB
6 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 4 |
| lineage4.1.1.2 | 1 |
| lineage1.2.2.2 | 4 |
| lineage3.1.1 | 4 |
| lineage4.3.2 | 2 |
| lineage2.2.1 | 11 |
| lineage4.4.1.1.1 | 1 |
| La1.8.1 | 16 |
| lineage4.3.3 | 2 |
| lineage4.1.2 | 6 |
| lineage1.1.3.1 | 1 |
| lineage2 | 1 |
| 11 | |
| lineage3 | 6 |
| La1.7.1 | 2 |
| La1.4 | 1 |
| lineage4.1.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.3.2.1 | 3 |
| lineage4.9.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.9 | 28 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage4 | 5 |
| lineage4.1.1.3 | 2 |
| lineage4.8 | 3 |
| lineage4.2.1 | 1 |
| lineage4.7 | 2 |
| lineage1.1.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.1.2;lineage3.1 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.6.2.2 | 1 |
| La1.8 | 1 |
| lineage4.9;La1.8 | 1 |
| La1 | 1 |
| La1.3 | 2 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 146 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4812546 | Sensitive | lineage4.1.2.1 | pe | ERR5908166 | Sensitive | lineage4.1.1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9121751 | Sensitive | lineage4.3.2 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10305661 | Sensitive | lineage2.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR11972331 | HR-TB | lineage2.2.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR17832798 | Other | lineage3 | None | SRR13986566 | Other | La1.7.1 | None | SRR16278273 | Other | La1.4 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR21662004 | Other | lineage4.1.2.1 | None | ERR176756 | Sensitive | lineage4.9.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR4813304 | MDR-TB | lineage4.3.3 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR216950 | Other | lineage1.1.3.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR4819131 | Other | lineage4 | None | SRR5341460 | Other | lineage3 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR2693238 | HR-TB | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6046189 | Other | lineage4.8 | None | ERR4821551 | Sensitive | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045178 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045379 | Other | None | SRR6045295 | Other | lineage4.7 | None | SRR6045289 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6982078 | Sensitive | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046790 | Other | lineage4.7 | None | ERR502480 | Other | lineage5.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR6982196 | Sensitive | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | None | SRR6981962 | Sensitive | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982064 | Sensitive | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982070 | RR-TB | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR5311076 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR8600071 | Other | La1.8.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1063855 | Other | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR10796597 | Other | lineage4 | None | ERR4187636 | Other | La1.8.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3797007 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4187921 | Other | None | ERR4187995 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4195622 | Sensitive | lineage4.3.2 | None | ERR4627369 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4769429 | Other | lineage4.9 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4772207 | Other | La1.3 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None |
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