EBG00000313339 - n.1518G>A


Drug resistance types
67 Sensitive 3 RR-TB 7 HR-TB 6 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 59 Other
lineage Counts
lineage Count
lineage4.1.2.1 4
lineage4.1.1.2 1
lineage1.2.2.2 4
lineage3.1.1 4
lineage4.3.2 2
lineage2.2.1 11
lineage4.4.1.1.1 1
La1.8.1 16
lineage4.3.3 2
lineage4.1.2 6
lineage1.1.3.1 1
lineage2 1
11
lineage3 6
La1.7.1 2
La1.4 1
lineage4.1.1 2
lineage4.4.1.1 2
lineage4.3.2.1 3
lineage4.9.1 1
lineage4.5 1
lineage4.3.4.2.1 2
lineage4.6.1.1 1
lineage4.9 28
lineage1.1.3.2 1
lineage4.1.1.3.1 1
lineage4.3.2.1;lineage3.1.1 1
lineage4 5
lineage4.1.1.3 2
lineage4.8 3
lineage4.2.1 1
lineage4.7 2
lineage1.1.2 1
lineage5.1.1 1
lineage4;lineage2.2.1 1
lineage4.1.2;lineage3.1 1
lineage2.2 1
lineage4.3.4.2 1
lineage4.9;La1.8.1 1
lineage4;lineage2 1
lineage4.3.4.1;lineage1.1.2 1
lineage3.1.2.2 1
lineage4.6.2.2 1
La1.8 1
lineage4.9;La1.8 1
La1 1
La1.3 2
La1.2 1
spoligotype Counts
spoligotype Count
None 146
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4812546 Sensitive lineage4.1.2.1 pe
ERR5908166 Sensitive lineage4.1.1.2 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117740 Other lineage3.1.1 None
ERR9121751 Sensitive lineage4.3.2 None
SRR1011488 Other lineage2.2.1 None
SRR10305661 Sensitive lineage2.2.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR10482948 Other La1.8.1 None
SRR10851629 Sensitive lineage4.3.3 None
SRR11972331 HR-TB lineage2.2.1 None
SRR1181319 Other lineage2.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1181085 Sensitive lineage4.1.2 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR124452 HR-TB lineage2 None
SRR124451 HR-TB None
SRR124453 HR-TB None
SRR17832798 Other lineage3 None
SRR13986566 Other La1.7.1 None
SRR16278273 Other La1.4 None
SRR2101617 Other lineage4.1.1 None
SRR1791940 Other La1.8.1 None
SRR1792247 Other La1.7.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR2101628 Other lineage4.3.2.1 None
SRR21662004 Other lineage4.1.2.1 None
ERR176756 Sensitive lineage4.9.1 None
SRR21737226 Sensitive lineage4.5 None
SRR22175227 Pre-XDR-TB lineage3 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR176547 Sensitive lineage4.6.1.1 None
ERR163988 Sensitive lineage4.1.2 None
ERR181940 Sensitive lineage3.1.1 None
ERR4813304 MDR-TB lineage4.3.3 None
ERR176619 Sensitive lineage4.9 None
ERR190388 Sensitive lineage4.9 None
ERR212109 Sensitive lineage1.2.2.2 None
ERR221608 Sensitive lineage1.2.2.2 None
ERR216950 Other lineage1.1.3.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR4037619 Sensitive lineage4.3.2.1 None
ERR245764 HR-TB lineage3.1.1 None
ERR245740 Sensitive lineage4.1.2 None
ERR245795 Sensitive lineage4.3.2.1;lineage3.1.1 None
ERR4819131 Other lineage4 None
SRR5341460 Other lineage3 None
SRR5153236 MDR-TB lineage2.2.1 None
SRR5341288 Pre-XDR-TB lineage3 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR5341430 Other lineage3 None
SRR6046117 RR-TB lineage4.9 None
ERR2660499 Sensitive lineage4.1.1.3 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR4820922 Other lineage4.1.2.1 gb
ERR2693238 HR-TB lineage4.9 None
ERR2660495 Sensitive lineage1.2.2.2 None
SRR6046189 Other lineage4.8 None
ERR4821551 Sensitive lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6045909 Other lineage4.8 None
SRR6045158 Other lineage4.9 None
SRR6045178 Other lineage3 None
SRR6045957 Other lineage4.9 None
SRR6045379 Other None
SRR6045295 Other lineage4.7 None
SRR6045289 Other None
SRR6046253 HR-TB lineage4.9 None
SRR6982078 Sensitive None
SRR6046739 Other lineage1.1.2 None
SRR6046790 Other lineage4.7 None
ERR502480 Other lineage5.1.1 None
ERR502483 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
SRR6982196 Sensitive None
ERR502490 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
SRR6982102 Other lineage2.2.1 None
SRR6896162 Sensitive lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR6982115 Sensitive lineage4 None
SRR6982138 Sensitive lineage4 None
SRR6982508 Sensitive lineage4.9 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6981912 Sensitive None
SRR6981962 Sensitive None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6982022 Sensitive lineage4.4.1.1 None
SRR6982064 Sensitive lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982035 Sensitive lineage4.9 None
SRR6982070 RR-TB None
SRR6982076 Sensitive lineage4.9 None
SRR6982405 Sensitive None
ERR027451 Pre-XDR-TB lineage2.2.1 ru
ERR5311076 Other La1.8.1 None
ERR5087707 Other La1.8.1 None
SRR6982558 Other lineage4.3.4.2 None
SRR8073606 Other La1.8.1 None
SRR7131123 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR323061 Sensitive lineage4.9 None
ERR5311086 Sensitive lineage4.9;La1.8.1 None
ERR5311088 Other La1.8.1 None
SRR6982510 Sensitive lineage4;lineage2 None
SRR8600071 Other La1.8.1 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR036233 Sensitive lineage4.3.4.1;lineage1.1.2 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR1063855 Other lineage4 None
ERR3283046 MDR-TB lineage4.9 None
ERR1063890 Sensitive lineage3.1.1 None
ERR10796597 Other lineage4 None
ERR4187636 Other La1.8.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3797007 Other La1.8.1 None
ERR473303 Sensitive lineage4.9 None
ERR4187921 Other None
ERR4187995 Other La1.8.1 None
ERR4188021 Other La1.8.1 None
ERR4188035 Other La1.8.1 None
ERR4188160 Other La1.8.1 None
ERR4195622 Sensitive lineage4.3.2 None
ERR4627369 Other La1.8.1 None
ERR4627379 Other La1.8.1 None
ERR4187819 Other La1.8 None
ERR4187916 Other La1.8.1 None
ERR4188255 Other lineage4.9;La1.8 None
ERR4769429 Other lineage4.9 None
ERR473341 Sensitive lineage4.1.1.3 None
ERR4769482 Sensitive La1 None
ERR4769505 Other lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769507 Sensitive lineage4.9 None
ERR4772207 Other La1.3 None
ERR4769549 Sensitive lineage4.9 None
ERR4772210 Other La1.2 None