EBG00000313339 - n.1881T>C


Drug resistance types
36 Sensitive 17 RR-TB 10 HR-TB 15 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 64 Other
lineage Counts
lineage Count
lineage4.9 28
lineage1.1.2 4
lineage2.2.1 12
lineage4 7
lineage4.1.2 2
lineage2.2.1.1 3
lineage4.9;lineage2 1
lineage4.9;lineage4.2.1 1
lineage4.6.1;lineage3.1.1 1
lineage4.6.1.1 3
4
lineage3 10
lineage3;lineage2.2 2
lineage4.6.1;lineage3.1 2
lineage3.1.1 3
lineage4.1.1.3 1
lineage4.3.2 1
lineage1.1.3.2 1
lineage4.8 10
lineage4.4.2 1
lineage4.9;lineage4.3 1
lineage1.1.3.1 3
lineage4.1.1 2
lineage4.3.3 7
lineage4.6.5 2
lineage4.1 1
lineage1.2.2.2 1
lineage4.2.1 2
lineage5 2
lineage4.1.2.1 13
lineage4.4.1.1 4
lineage3.1.2.1 1
lineage4.6.2.2 5
lineage4.3.4.1 1
lineage3.1.2 1
lineage4.3.4.2.1 2
lineage5.1.1 1
lineage6.1.1 1
lineage4.2.1.1 1
lineage4.3.4 1
lineage4;lineage3.1 1
spoligotype Counts
spoligotype Count
None 150
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR473279 Other lineage4.9 None
ERR473311 Sensitive lineage4.9 None
ERR473340 Sensitive lineage1.1.2 None
ERR5979787 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR736825 Sensitive lineage4.9 None
ERR773806 Sensitive lineage2.2.1 None
ERR751414 MDR-TB lineage4 None
ERR773804 Sensitive lineage4.9 None
ERR736850 Sensitive lineage4.9 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
ERR970455 RR-TB lineage4.1.2 None
ERR972801 RR-TB lineage2.2.1.1 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1013610 HR-TB lineage4 None
SRR1166181 MDR-TB lineage4 None
SRR1173190 Sensitive lineage4.9 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1173139 Sensitive lineage4.9 None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
SRR1173293 MDR-TB lineage4.6.1;lineage3.1.1 None
SRR1173344 Sensitive lineage4.6.1.1 None
SRR1173269 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1173335 Sensitive lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173380 Pre-XDR-TB lineage3;lineage2.2 None
SRR1173508 Sensitive lineage4.9 None
SRR1173565 MDR-TB lineage4.6.1;lineage3.1 None
SRR1173421 RR-TB lineage4.9 None
SRR1173704 Sensitive lineage4.6.1.1 None
SRR1173705 Other lineage4.9 None
SRR1173766 Sensitive lineage4.9 None
SRR1173764 Sensitive lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1173799 MDR-TB lineage3.1.1 None
SRR1173768 Sensitive lineage4.9 None
SRR1173800 Pre-XDR-TB lineage3;lineage2.2 None
SRR1174277 Pre-XDR-TB lineage2.2.1 None
SRR1173832 MDR-TB lineage4.6.1;lineage3.1 None
SRR1173865 Sensitive lineage4.9 None
SRR13591377 Sensitive lineage4.1.1.3 None
SRR13591376 Sensitive lineage4.3.2 None
ERR176781 Sensitive lineage1.1.3.2 None
SRR22048374 Sensitive lineage4.8 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815777 Other lineage4.9 None
ERR4815301 Other lineage4.4.2 None
ERR164004 Sensitive lineage4.9;lineage4.3 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814709 Other lineage4.1.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4815467 Other lineage3 None
ERR4814763 Other lineage2.2.1 None
ERR4814745 Other lineage4.6.5 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815502 Other lineage4.1 None
ERR4815517 Other lineage1.2.2.2 None
ERR4814896 Other lineage2.2.1.1 None
ERR4814911 Other lineage4.3.3 None
ERR4816238 Sensitive lineage4.1.1 None
ERR4816968 Other lineage4.2.1 gb
ERR4816232 Other lineage4 None
ERR4816967 RR-TB lineage5 None
ERR4817055 Other lineage4.1.2.1 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816270 Other lineage4.1.2.1 None
ERR2124088 Other lineage4.4.1.1 None
SAMN02567685 Pre-XDR-TB lineage2.2.1 None
ERR1034791 RR-TB None
SAMN02567670 Sensitive lineage4.6.1.1 None
ERR4816464 Other lineage3 None
ERR2124090 MDR-TB lineage2.2.1 None
ERR4816531 Other lineage4.1.2 None
SRR3742667 Sensitive lineage4.9 None
ERR4816856 Other lineage4.1.2.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4818691 Other lineage4.8 None
ERR4818655 Other lineage4.3.3 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4818752 Other lineage3 None
ERR4819073 Other lineage4.1.2.1 None
ERR4819011 Other lineage3.1.2.1 None
ERR1873445 MDR-TB lineage2.2.1 None
ERR245790 Sensitive None
ERR4818465 Other lineage3 gb
ERR4818444 Other lineage4.6.5 None
ERR4817584 MDR-TB lineage3 None
ERR4818570 Other lineage4.3.3 None
ERR4819096 Other lineage4.4.1.1 None
ERR4820230 Other lineage4.1.2.1 gb
ERR4819166 Other lineage3 gb
ERR4819191 Other lineage4.6.2.2 None
ERR4819324 Other lineage4.8 gb
ERR4820720 Other lineage4.1.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819198 Other lineage2.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819533 Other lineage1.1.2 None
ERR4820324 Other lineage4 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819622 Other lineage4.1.2.1 None
ERR4819636 Other lineage3.1.2 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4821214 RR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR4820188 Other lineage3 gb
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4821812 Other lineage4.8 gb
ERR4821119 Other lineage4.4.1.1 None
ERR4821028 Sensitive lineage3.1.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821286 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4821360 Other lineage4.1.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4822167 Other lineage4.6.2.2 None
ERR4821563 HR-TB lineage1.1.2 gb
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821761 Other lineage3 gb
ERR502517 MDR-TB lineage5.1.1 None
ERR4829337 Other lineage4.8 None
SRR6046534 Other lineage1.1.2 None
SRR6896576 Other lineage2.2.1 None
SRR6046152 Other lineage4.9 None
SRR5818604 Sensitive lineage4.1.2.1 dj
SRR6045267 RR-TB lineage4 None
SRR7131238 Sensitive lineage6.1.1 None
ERR502942 Sensitive lineage4.9 None
SRR7131287 Other lineage2.2.1.1 None
SRR7131296 Other lineage4.3.3 None
ERR323057 Sensitive lineage4.9 None
SRR7646056 Other lineage4.2.1.1 None
SRR7755706 MDR-TB lineage4.2.1 None
ERR323061 Sensitive lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR323067 Sensitive lineage4.3.4.2.1 None
ERR10796565 RR-TB lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796636 Other lineage4.1.2.1 None
ERR3468754 Sensitive lineage4.9 None
ERR405222 Sensitive lineage4;lineage3.1 None