EBG00000313339 - n.1881T>C
Drug resistance types
36 Sensitive
17 RR-TB
10 HR-TB
15 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| lineage1.1.2 | 4 |
| lineage2.2.1 | 12 |
| lineage4 | 7 |
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.9;lineage2 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage4.6.1.1 | 3 |
| 4 | |
| lineage3 | 10 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage3.1.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.8 | 10 |
| lineage4.4.2 | 1 |
| lineage4.9;lineage4.3 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1 | 2 |
| lineage4.3.3 | 7 |
| lineage4.6.5 | 2 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 2 |
| lineage5 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.4.1.1 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 5 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage5.1.1 | 1 |
| lineage6.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 150 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473279 | Other | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR5979787 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR751414 | MDR-TB | lineage4 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR22048374 | Sensitive | lineage4.8 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815777 | Other | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4815467 | Other | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814745 | Other | lineage4.6.5 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815502 | Other | lineage4.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4816238 | Sensitive | lineage4.1.1 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4816232 | Other | lineage4 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034791 | RR-TB | None | SAMN02567670 | Sensitive | lineage4.6.1.1 | None | ERR4816464 | Other | lineage3 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR4816531 | Other | lineage4.1.2 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4817874 | Other | lineage3 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818752 | Other | lineage3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR245790 | Sensitive | None | ERR4818465 | Other | lineage3 | gb | ERR4818444 | Other | lineage4.6.5 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR4819166 | Other | lineage3 | gb | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820324 | Other | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4821214 | RR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820188 | Other | lineage3 | gb | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821812 | Other | lineage4.8 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822167 | Other | lineage4.6.2.2 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6046152 | Other | lineage4.9 | None | SRR5818604 | Sensitive | lineage4.1.2.1 | dj | SRR6045267 | RR-TB | lineage4 | None | SRR7131238 | Sensitive | lineage6.1.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None |
|---|
