EBG00000313339 - n.1898T>G
Drug resistance types
42 Sensitive
6 RR-TB
7 HR-TB
16 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 38 |
| lineage4.6.1.1 | 3 |
| lineage4.6.1;lineage3.1.1 | 1 |
| 3 | |
| lineage2.2.1 | 9 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage3 | 3 |
| lineage3.1.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.9;lineage4.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.6.5 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4 | 7 |
| lineage4.3.3 | 3 |
| lineage4.6.1 | 1 |
| lineage6.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage2 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173310 | MDR-TB | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173833 | Other | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SAMN02567670 | Sensitive | lineage4.6.1.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4816238 | Sensitive | lineage4.1.1 | None | SRR22528566 | MDR-TB | lineage4.1.2.1 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR245790 | Sensitive | None | ERR1034791 | RR-TB | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818444 | Other | lineage4.6.5 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR6046152 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4820817 | Other | lineage4.1.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7131238 | Sensitive | lineage6.1.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR017781 | Other | lineage3 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR1063855 | Other | lineage4 | None | ERR405191 | Other | lineage4.9 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR473279 | Other | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR5979787 | Other | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR6359069 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR751414 | MDR-TB | lineage4 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1002680 | MDR-TB | lineage2.2.1 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None |
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