EBG00000313339 - n.2754G>T


Drug resistance types
115 Sensitive 9 RR-TB 24 HR-TB 33 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 46 Other
lineage Counts
lineage Count
lineage2.2.1 38
lineage4.3.3 5
4
lineage4.9 21
lineage4.1.1.3.1 2
La1.7.1 2
lineage4.2.2 2
lineage2.2.1.1 10
lineage1.1.2 34
lineage3 23
lineage4.8 9
lineage4.6.1.1 4
lineage2.2.1.2 2
lineage3.1.2.1 7
lineage2.2.2 5
lineage3.1.1 3
lineage4.1.2.1 5
lineage1.1.3 3
lineage4.1.1 1
lineage4.6 1
lineage4.4.2 1
lineage4.6.1 1
lineage4.6.2.2 1
lineage4.6.1.2 1
lineage4 2
lineage4.4.1.1 5
lineage4.2.1;lineage2.2.1 1
lineage4.2.1.1 1
lineage4.2.1 1
lineage4.4.1.1.1 3
La1.8.1 19
lineage4;La1.8.1 1
La1 1
lineage4.9;La1.8 1
La1.8 1
lineage4.3.2 2
La1.2 1
lineage4.1.2.1.1 1
lineage2.2 4
lineage4.9;lineage2.2.1 2
lineage4.3.2.1 2
lineage1.2.2.2 3
lineage3.1.2 1
lineage1.2.2.1 1
spoligotype Counts
spoligotype Count
None 238
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13423535 MDR-TB lineage2.2.1 None
SRR14782576 Sensitive lineage4.3.3 None
SRR14782555 Pre-XDR-TB lineage2.2.1 None
SRR1791910 Other None
SRR16156814 Sensitive lineage4.9 None
SRR16156291 Other lineage4.9 None
SRR16157045 Sensitive lineage4.9 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002949 Sensitive lineage2.2.1 None
SRR18003040 MDR-TB lineage2.2.1 None
SRR18003051 Other lineage2.2.1 None
SRR2100016 Sensitive lineage4.1.1.3.1 None
SRR18391668 Other La1.7.1 None
SRR18511602 Sensitive lineage4.2.2 None
SRR18391658 Other La1.7.1 None
ERR1633962 Sensitive lineage2.2.1.1 None
SRR21240197 Sensitive lineage4.3.3 None
SAMN02599094 Sensitive lineage1.1.2 None
SRR3105762 HR-TB None
SRR21595927 HR-TB lineage2.2.1 None
SAMN02599177 Sensitive lineage3 None
SRR3675219 Other lineage4.9 None
SRR6074059 Sensitive lineage4.8 None
ERR171156 Sensitive lineage4.9 None
ERR176544 Sensitive lineage4.6.1.1 None
SAMN02599164 Sensitive lineage2.2.1.1 None
SAMN02599066 Sensitive lineage2.2.1.2 None
SRR6280275 Sensitive lineage2.2.1.1 cn
SAMN02599170 Sensitive lineage1.1.2 None
SAMN02599165 Sensitive lineage1.1.2 None
SRR3675525 Other lineage4.8 None
SAMN02599156 HR-TB lineage3.1.2.1 None
SRR6280216 RR-TB lineage2.2.2 cn
SRR6280270 Sensitive lineage2.2.1 cn
SRR3742667 Sensitive lineage4.9 None
ERR2245343 Sensitive lineage3.1.1 no
SRR3743190 Sensitive lineage4.1.2.1 None
SRR6280308 Sensitive lineage2.2.1 cn
SAMN02403473 Pre-XDR-TB lineage2.2.2 None
ERR2245344 Sensitive lineage3.1.1 no
ERR2245292 HR-TB lineage3.1.1 no
SAMN02599062 MDR-TB lineage3.1.2.1 in
SAMN02599140 Sensitive lineage1.1.2 None
SAMN02599179 MDR-TB lineage1.1.2 None
SAMN02599162 Sensitive lineage1.1.2 None
ERR4818166 Sensitive lineage4.3.3 gb
SAMN02599064 Sensitive lineage2.2.1 None
SRR6280210 Sensitive lineage2.2.1 cn
ERR1352314 Sensitive lineage2.2.1 cn
SRR5152904 Other lineage2.2.1 None
SRR5152926 MDR-TB lineage2.2.1 None
SRR7898217 MDR-TB lineage1.1.2 None
SAMN02599137 Sensitive lineage3 None
SAMN02599161 Sensitive lineage1.1.3 None
ERR4818471 Other lineage2.2.1 None
ERR2512864 Sensitive lineage4.1.2.1 gb
SRR7898215 HR-TB lineage4.1.2.1 None
SRR6280271 Sensitive lineage2.2.1 cn
SAMN02598997 Sensitive lineage3 in
SRR6280286 Sensitive lineage2.2.1 None
ERR4819449 Sensitive lineage4.9 None
ERR2179740 Sensitive lineage4.2.2 cn
SRR6044769 Other lineage1.1.2 None
SRR6046127 Sensitive lineage3 None
SAMN02599075 Sensitive lineage1.1.2 None
SRR6280150 Sensitive lineage2.2.1 cn
SRR6280188 Sensitive lineage2.2.1.1 cn
ERR2747607 Sensitive lineage4.9 None
SRR5818627 Sensitive lineage4.1.2.1 dj
SAMN02598962 Sensitive lineage1.1.2 in
SRR6044916 Other lineage4.1.1 None
SAMN02598991 Other lineage3 in
SRR6046442 Other lineage3 None
SRR6045376 HR-TB lineage4.1.2.1 gb
SRR6280229 Sensitive lineage2.2.1 cn
SRR6046258 Sensitive lineage4.6 gb
SAMN02599138 Sensitive lineage1.1.2 in
SRR6046558 Other lineage3 gb
ERR279657 Sensitive lineage2.2.1.1 None
SRR6789617 RR-TB lineage2.2.1 None
SRR6280233 Sensitive lineage2.2.1 cn
ERR495188 Sensitive lineage2.2.1.1 None
ERR501647 Sensitive None
SRR6280312 Sensitive lineage2.2.1.1 cn
SRR6785195 Sensitive lineage2.2.1 None
SRR6896534 Sensitive None
SRR6824297 Pre-XDR-TB lineage2.2.1 cn
SRR6797383 Other lineage3.1.2.1 None
SRR6855793 Sensitive lineage2.2.1 None
SRR6824423 Sensitive lineage4.4.2 None
SRR6824572 MDR-TB lineage2.2.1 None
SRR7535054 Sensitive lineage4.6.1 None
SRR7131121 Other lineage4.3.3 None
SRR7535053 Sensitive lineage3 None
ERR5162122 HR-TB lineage4.9 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131096 Other lineage4.8 None
SRR7535074 Sensitive lineage3 None
SRR7535073 Sensitive lineage4.6.1.1 None
SRR7535077 MDR-TB lineage4.6.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7535079 Sensitive lineage4.6.1.1 None
SRR7535081 Sensitive lineage4.6.1.1 None
SRR7535080 HR-TB lineage4.8 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR7645856 Sensitive lineage4.4.1.1 None
SRR7755705 MDR-TB lineage4.2.1;lineage2.2.1 None
SRR7646056 Other lineage4.2.1.1 None
SRR7646073 MDR-TB lineage4.2.1 None
ERR037235 Sensitive lineage4.9 None
SRR9971192 MDR-TB lineage4.4.1.1.1 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SRR9217358 Sensitive lineage1.1.2 None
ERR10796575 RR-TB lineage4.9 None
ERR10796628 Other lineage4.3.3 None
ERR10796593 RR-TB lineage4 None
ERR3439522 Other La1.8.1 None
ERR3468435 Other La1.8.1 None
ERR3468445 Other La1.8.1 None
ERR3468538 Other La1.8.1 None
ERR3468522 Sensitive lineage4;La1.8.1 None
ERR3468561 HR-TB lineage4.9 None
ERR3468546 Other La1.8.1 None
ERR3468551 HR-TB La1.8.1 None
ERR3468562 Other La1.8.1 None
ERR3468584 Sensitive lineage4.9 None
ERR3468577 HR-TB La1 None
ERR3468612 Other La1.8.1 None
ERR3468594 Other La1.8.1 None
ERR3468601 HR-TB La1.8.1 None
ERR4188215 Other La1.8.1 None
ERR3468644 HR-TB La1.8.1 None
ERR3468668 Other La1.8.1 None
ERR3470663 Sensitive lineage3 None
ERR4188189 Other La1.8.1 None
ERR4188208 Other La1.8.1 None
ERR3468619 HR-TB lineage4.9;La1.8 None
ERR3468643 Other La1.8 None
ERR3468653 Other lineage4.9 None
ERR3468659 Other lineage4.9 None
ERR3468675 Other La1.8.1 None
ERR3468683 Other La1.8.1 None
ERR4178291 Sensitive lineage4.3.2 None
ERR4188204 Other La1.8.1 None
ERR4188223 Other La1.8.1 None
ERR4596906 Sensitive lineage1.1.2 None
ERR4596937 Sensitive lineage1.1.2 None
ERR4769478 Other La1.2 None
ERR5865066 MDR-TB lineage4.8 None
ERR5865065 MDR-TB lineage4.8 None
SRR1013530 HR-TB lineage4.9 None
ERR5865230 MDR-TB lineage2.2.1 None
ERR5865231 MDR-TB lineage2.2.1 None
ERR5979445 Sensitive lineage3 None
ERR6865895 Sensitive lineage4.3.2 None
ERR9117723 Other lineage4.1.1.3.1 None
ERR760878 MDR-TB lineage4.1.2.1.1 ar
ERR7737736 MDR-TB lineage2.2.1 None
SRR1013527 RR-TB lineage2.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR1013531 MDR-TB lineage4.9 None
SRR1013528 Pre-XDR-TB lineage2.2 None
SRR1062868 HR-TB lineage4.9 None
SRR1062869 Pre-XDR-TB lineage4.9 None
SRR1062864 Sensitive lineage4.9;lineage2.2.1 None
SRR1062867 RR-TB lineage4.9;lineage2.2.1 None
SRR1062865 HR-TB lineage2.2.2 None
SRR10869138 Sensitive lineage2.2.1 None
SRR10869015 Sensitive lineage4.8 None
SRR10869306 Sensitive lineage2.2.1.1 None
SRR11349176 RR-TB lineage3 None
SRR10869323 HR-TB lineage4.3.2.1 None
SRR1106670 Other lineage4.9 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR11349179 MDR-TB lineage2.2.1 None
SRR11349174 MDR-TB lineage4.4.1.1.1 None
SRR1165236 Pre-XDR-TB lineage2.2 None
SRR1141261 MDR-TB lineage4.9 None
SRR1167264 Pre-XDR-TB lineage2.2 None
SRR1169473 Sensitive lineage1.1.2 None
SRR1169516 Sensitive lineage1.2.2.2 None
SRR1169497 HR-TB lineage1.1.2 None
SRR1172135 Sensitive lineage3.1.2 None
SRR1169576 Sensitive lineage1.1.2 None
SRR1172874 Sensitive lineage2.2.1 None
SRR1172145 Sensitive lineage1.2.2.2 None
SRR1172300 Sensitive lineage1.1.2 None
SRR1172705 Sensitive lineage2.2.1.1 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR1172881 Sensitive lineage1.1.2 None
SRR1172226 HR-TB lineage1.2.2.2 None
SRR1172709 Sensitive lineage1.1.3 None
SRR1172722 Sensitive lineage1.1.2 None
SRR1172840 Sensitive lineage1.1.2 None
SRR1172873 MDR-TB lineage1.1.2 None
SRR1172943 HR-TB lineage3 None
SRR1172911 Sensitive lineage3 None
SRR1172904 Sensitive lineage1.1.2 None
SRR1172928 MDR-TB lineage3.1.2.1 None
SRR1172958 Sensitive lineage2.2.1 None
SRR1172949 Sensitive lineage1.1.2 None
SRR1173013 Sensitive lineage1.1.2 None
SRR1172968 Sensitive lineage3 None
SRR1173008 Sensitive lineage1.1.2 None
SRR1173022 Sensitive lineage3 None
SRR1173037 Sensitive lineage1.1.2 None
SRR1173036 Sensitive lineage1.1.3 None
SRR1173111 Sensitive lineage1.1.2 None
SRR1173047 Sensitive lineage1.1.2 None
SRR1173055 MDR-TB lineage2.2.1 None
SRR1173090 Sensitive lineage3 None
SRR1173099 Sensitive lineage2.2.1.1 None
SRR1173129 Other lineage1.2.2.1 None
SRR1173183 Sensitive lineage1.1.2 None
SRR1173174 Pre-XDR-TB lineage2.2.2 None
SRR1173567 Other lineage3 None
SRR1173250 Sensitive lineage2.2.1 None
SRR1173377 Pre-XDR-TB lineage2.2.2 None
SRR1173559 Sensitive lineage3 None
SRR1173694 Sensitive lineage1.1.2 None
SRR1173632 RR-TB lineage2.2.1 None
SRR1173801 Other lineage3 None
SRR1174305 Sensitive lineage3 None
SRR1173874 Other lineage1.1.2 None
SRR1175032 Sensitive lineage3 None
SRR1175114 Sensitive lineage2.2.1.2 None
SRR1175134 MDR-TB lineage3.1.2.1 None
SRR1175132 HR-TB lineage3 None
SRR1180929 MDR-TB lineage4.4.1.1 None
SRR1175173 HR-TB lineage3.1.2.1 None
SRR1180170 Sensitive lineage1.1.2 None
SRR1180972 MDR-TB lineage2.2.1 None
SRR1180947 Sensitive lineage4.8 None
SRR1181051 MDR-TB lineage4.4.1.1 None
SRR1180999 Sensitive lineage4.8 None
SRR1181100 Pre-XDR-TB lineage4.4.1.1 None
SRR1181120 MDR-TB lineage2.2.1 None