EBG00000313339 - n.2754G>T


Drug resistance types
93 Sensitive 1 RR-TB 7 HR-TB 26 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 22 Other
lineage Counts
lineage Count
lineage2.2.1 25
lineage4.2.2 2
lineage2.2.1.1 8
lineage4.4.1.1.1 3
lineage3 15
lineage4.3.2 2
La1.8.1 3
lineage2.2.2 6
lineage4.1.1.3 1
lineage1.1.2 27
lineage4.6.1.1 3
lineage3.1.2.1 6
lineage4.3.3 6
lineage4.8 7
lineage4.9 13
lineage4.1.2.1 2
lineage4.6.1.2 1
lineage4.2.2.2 1
lineage1.2.2.2 3
lineage4.4.1.1 2
lineage4.4.2 1
lineage4.1 1
lineage2.2.1.2 2
lineage3.1.2 1
lineage4.3.2;lineage4.9 1
lineage4.3.2.1 1
La1.2 1
lineage4.2.1.1 1
lineage4.6.2.2 1
lineage2.2.1;lineage4.2.1 1
lineage4.3.4;lineage4.9 1
lineage4.9.1 2
lineage1.2.2.1 1
lineage1.1.3 1
lineage4.1.2.1.1 1
lineage4.2.1 1
lineage4.3 1
lineage4.3.2.1;lineage4.9 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 157
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5152926 MDR-TB lineage2.2.1 None
SRR1173055 Sensitive lineage2.2.1 None
SRR18511602 Sensitive lineage4.2.2 None
ERR279657 Sensitive lineage2.2.1.1 None
SRR11349174 MDR-TB lineage4.4.1.1.1 None
SRR9971192 MDR-TB lineage4.4.1.1.1 None
SRR7535074 Sensitive lineage3 None
ERR4178291 Sensitive lineage4.3.2 None
ERR3468601 Other La1.8.1 None
SRR6280216 RR-TB lineage2.2.2 cn
ERR7737736 MDR-TB lineage2.2.1 None
SRR8758896 Pre-XDR-TB lineage4.1.1.3 None
SAMN02599138 Sensitive lineage1.1.2 in
SRR7535079 Sensitive lineage4.6.1.1 None
SAMN02599140 Sensitive lineage1.1.2 None
SRR1173047 Sensitive lineage1.1.2 None
SRR1173801 Other lineage3 None
SAMN02599179 MDR-TB lineage1.1.2 None
SAMN02599064 Sensitive lineage2.2.1 None
SRR1172722 Sensitive lineage1.1.2 None
SRR1175173 HR-TB lineage3.1.2.1 None
SRR7898217 MDR-TB lineage1.1.2 None
SRR7755733 MDR-TB lineage4.3.3 None
SRR1172928 MDR-TB lineage3.1.2.1 None
SRR1172873 MDR-TB lineage1.1.2 None
SRR10869015 Sensitive lineage4.8 None
SRR1180170 Sensitive lineage1.1.2 None
SRR18002949 Sensitive lineage2.2.1 None
SRR7131121 Other lineage4.3.3 None
SRR1175132 HR-TB lineage3 None
SRR1013531 Sensitive lineage4.9 None
SRR7898215 HR-TB lineage4.1.2.1 None
ERR3470663 Sensitive lineage3 None
SRR1238557 Other lineage4.9 None
SRR21240197 Sensitive lineage4.3.3 None
SAMN02598991 Other lineage3 in
SRR1172958 Sensitive lineage2.2.1 None
SRR5152904 Other lineage2.2.1 None
SRR7535077 Sensitive lineage4.6.1.2 None
SRR6280286 Sensitive lineage2.2.1 None
SRR1175134 MDR-TB lineage3.1.2.1 None
SRR9971197 MDR-TB lineage4.4.1.1.1 None
SAMN02599075 Sensitive lineage1.1.2 None
SRR1238558 Other lineage4.9 None
SRR7070609 Other lineage4.2.2.2 None
SRR1172300 Sensitive lineage1.1.2 None
SRR1169516 Sensitive lineage1.2.2.2 None
SRR1172848 MDR-TB lineage1.1.2 None
SRR3724795 Sensitive lineage4.3.3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR12420692 MDR-TB lineage2.2.1 None
SRR6207284 Sensitive lineage4.3.3 None
ERR5865230 MDR-TB lineage2.2.1 None
SRR6824423 Sensitive lineage4.4.2 None
SRR10869306 Sensitive lineage2.2.1.1 None
SRR1167264 Pre-XDR-TB lineage2.2.2 None
SRR3105762 Sensitive lineage4.1 None
SRR7535082 Other lineage4.9 None
SRR7535054 Sensitive lineage4.6.1.1 None
SRR1175114 Sensitive lineage2.2.1.2 None
SRR1172135 Sensitive lineage3.1.2 None
SRR1173099 Sensitive lineage2.2.1.1 None
SRR1173377 Pre-XDR-TB lineage2.2.2 None
SRR1173037 Sensitive lineage1.1.2 None
SAMN02599156 HR-TB lineage3.1.2.1 None
SRR1013532 Sensitive lineage4.3.2;lineage4.9 None
SRR3742667 Sensitive lineage4.9 None
SRR10869323 HR-TB lineage4.3.2.1 None
SRR7535081 Sensitive lineage4.6.1.1 None
SRR1172705 Sensitive lineage2.2.1.1 None
ERR4769478 Other La1.2 None
SRR1173008 Sensitive lineage1.1.2 None
SRR1181100 Pre-XDR-TB lineage4.4.1.1 None
SAMN02599162 Sensitive lineage1.1.2 None
SRR1169576 Sensitive lineage1.1.2 None
SRR1141261 Sensitive lineage4.9 None
ERR4596937 Sensitive lineage1.1.2 None
SRR7646056 Other lineage4.2.1.1 None
SRR7131004 Other lineage4.6.2.2 None
SRR7755705 MDR-TB lineage2.2.1;lineage4.2.1 None
SRR3724661 Sensitive lineage4.8 None
SRR1173090 Sensitive lineage3 None
SRR1180999 Sensitive lineage4.8 None
SRR6785195 Sensitive lineage2.2.1 None
SRR6824572 MDR-TB lineage2.2.1 None
SRR1106670 Sensitive lineage4.9 None
ERR5979445 Sensitive lineage3 None
SRR1013527 Other lineage2.2.1 None
SRR18003040 MDR-TB lineage2.2.1 None
SRR1172911 Sensitive lineage3 None
ERR5865065 MDR-TB lineage4.8 None
SRR1169473 Sensitive lineage1.1.2 None
SRR1173013 Sensitive lineage1.1.2 None
SRR1173111 Sensitive lineage1.1.2 None
SRR6280150 Sensitive lineage2.2.1 cn
SRR6046442 Other lineage3 None
ERR4596906 Sensitive lineage1.1.2 None
ERR10796575 Other lineage4.3.4;lineage4.9 None
SRR1173183 Sensitive lineage1.1.2 None
SRR6824297 Pre-XDR-TB lineage2.2.1 cn
ERR6865895 Sensitive lineage4.3.2 None
SRR16157045 Sensitive lineage4.9 None
SRR14782555 Other lineage2.2.1 None
SRR7645853 MDR-TB lineage2.2.1 None
SAMN02599094 Sensitive lineage1.1.2 None
SAMN02599177 Sensitive lineage3 None
ERR1633962 Sensitive lineage2.2.1.1 None
ERR5865231 MDR-TB lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
SAMN02599164 Sensitive lineage2.2.1.1 None
SAMN02599170 Sensitive lineage1.1.2 None
SRR6855793 Sensitive lineage2.2.1 None
SAMN02599066 Sensitive lineage2.2.1.2 None
SRR7535053 Sensitive lineage3 None
SRR1238559 Other lineage4.9 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR638895 Sensitive lineage4.9 None
SRR6280270 Sensitive lineage2.2.1 cn
SAMN02599165 Sensitive lineage1.1.2 None
SRR1172145 Sensitive lineage1.2.2.2 None
SRR16156291 Sensitive lineage4.9 None
SRR1172949 Sensitive lineage1.1.2 None
SRR1062869 Sensitive lineage4.9.1 None
SRR1173129 Other lineage1.2.2.1 None
SAMN02403473 Pre-XDR-TB lineage2.2.2 None
SRR1180947 Sensitive lineage4.8 None
SAMN02599062 MDR-TB lineage3.1.2.1 in
ERR495188 Sensitive lineage2.2.1.1 None
ERR5865066 MDR-TB lineage4.8 None
ERR4188208 Sensitive La1.8.1 None
SRR12420668 MDR-TB lineage2.2.1 None
SAMN02599137 Sensitive lineage3 None
SRR1173022 Sensitive lineage3 None
SRR1165236 Pre-XDR-TB lineage2.2.2 None
SRR10869138 Sensitive lineage2.2.1 None
SAMN02599161 Sensitive lineage1.1.3 None
SRR1013530 Other lineage4.9.1 None
SRR7535080 Sensitive lineage4.8 None
SRR1172840 Sensitive lineage1.1.2 None
ERR760878 MDR-TB lineage4.1.2.1.1 ar
SRR1175032 Sensitive lineage3 None
SRR7646073 MDR-TB lineage4.2.1 None
SRR1062865 Sensitive lineage2.2.2 None
ERR1352314 Sensitive lineage2.2.1 cn
SRR6280312 Sensitive lineage2.2.1.1 cn
SAMN02598962 Sensitive lineage1.1.2 in
SRR1172226 HR-TB lineage1.2.2.2 None
ERR2179740 Sensitive lineage4.2.2 cn
SRR5818627 Sensitive lineage4.1.2.1 dj
SAMN02598997 Sensitive lineage3 in
SRR1062864 Sensitive lineage4.9 None
ERR10796593 Other lineage4.3 None
SRR1062868 Sensitive lineage4.3.2.1;lineage4.9 None
SRR16156814 Sensitive lineage4.9 None
SRR7070327 Other lineage1.1.3.1 None
SRR1791910 Sensitive La1.8.1 None