EBG00000313339 - n.2964C>A
Drug resistance types
45 Sensitive
1 RR-TB
6 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 4 |
| lineage2.2.1 | 5 |
| lineage3 | 5 |
| lineage1.2.2.1 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| 3 | |
| lineage4.9;La1.8.1 | 1 |
| La1.8.1 | 6 |
| lineage4.9 | 5 |
| lineage5.1.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 2 |
| lineage1.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| La1.7.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| La1.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage1.1.3.2 | 3 |
| lineage4.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage4 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR234178 | Sensitive | lineage3 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR279477 | Sensitive | lineage4.4.1.1.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | DRR099689 | Sensitive | lineage1.1.1.1 | None | ERR323036 | HR-TB | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502507 | Sensitive | lineage5.1.4 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4811087 | Sensitive | lineage4.5 | cn | ERR4797345 | Sensitive | lineage1.2.2.2 | in | ERR4797862 | Sensitive | lineage1.2.2.2 | in | ERR718268 | Sensitive | lineage1.1.1 | None | ERR5979426 | Sensitive | lineage3 | None | ERR5979436 | Sensitive | lineage3 | None | ERR9117694 | Sensitive | lineage3 | None | ERR751729 | Other | lineage1.1.1 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR11294512 | Other | La1.8.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR16278273 | Other | La1.4 | None | SRR1792247 | Other | La1.7.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR1792265 | Other | La1.8.1 | None | ERR11069131 | Sensitive | lineage3 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR181708 | RR-TB | lineage4;lineage1.1.2 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR212100 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216949 | Sensitive | lineage4 | None | SRR4033203 | Sensitive | lineage4.9 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None |
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