Rv0486 - c.229C>T
Drug resistance types
32 Sensitive
1 RR-TB
70 HR-TB
13 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 13 |
| lineage2.2.1 | 35 |
| 90 | |
| lineage4.9 | 5 |
| lineage2.2 | 5 |
| La2 | 1 |
| lineage3 | 2 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8 | 1 |
| lineage1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2.1 | 2 |
| La3 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage2 | 2 |
| lineage4.5 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.6.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 169 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5007188 | Other | lineage4 | None | ERR4819789 | Sensitive | lineage2.2.1 | None | SAMN02360573 | Sensitive | lineage2.2.1 | kr | SRR6045526 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | SAMN02398695 | Pre-XDR-TB | lineage2.2.1 | kr | SRR5341333 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | ERR1213836 | MDR-TB | lineage2.2.1 | kr | SRR6045327 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR3132288 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323039 | HR-TB | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7535086 | Other | None | SRR6789626 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | DRR034400 | Sensitive | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | DRR188996 | Sensitive | lineage2.2.1 | None | DRR034399 | Sensitive | lineage2.2.1 | None | DRR034535 | Sensitive | lineage2.2.1 | None | DRR130221 | Sensitive | lineage2.2.1 | None | DRR034407 | Sensitive | lineage2.2.1 | None | ERR1063858 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR3797069 | Other | None | ERR5336148 | Other | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4797264 | Sensitive | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4811142 | MDR-TB | None | SRR17657936 | MDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736865 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR22251731 | Sensitive | lineage2.2.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9117709 | HR-TB | None | ERR9030495 | Other | lineage1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786604 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | ERR9787197 | Other | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013587 | Sensitive | lineage2.2.1 | None | SRR1020015 | Sensitive | lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013588 | Sensitive | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1144757 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048972 | Sensitive | lineage2.2.1 | None | SRR1048973 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1173118 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173629 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1175090 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR15315834 | MDR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19320503 | Sensitive | lineage2.2.1 | None | SRR22249744 | Sensitive | lineage2.2.1 | None | ERR11138628 | MDR-TB | lineage2.2.1 | None | ERR11082693 | Sensitive | lineage2.2.1 | None | SRR21727753 | Sensitive | lineage2.2.1 | None | ERR11138615 | MDR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR21733049 | Sensitive | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR212033 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675510 | Other | None | ERR4817024 | HR-TB | lineage4.6.5 | None | ERR212001 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR7496501 | Sensitive | lineage2.2.1 | us | ERR502912 | Other | lineage2.2.1 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None |
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