lineage | Count |
---|---|
lineage4.9 | 31 |
lineage2.2.1 | 4 |
11 | |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage2.2.1.1 | 1 |
lineage3 | 4 |
lineage4.5 | 1 |
lineage3.1.2.1 | 1 |
lineage4.8 | 1 |
lineage4.6.1.2 | 4 |
lineage4.1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.2.1 | 2 |
lineage4 | 6 |
lineage4.3.4.2.1 | 1 |
La1 | 2 |
La1.8.1 | 3 |
lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 78 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815471 | Other | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR1750916 | Other | lineage2.2.1.1 | None | SRR3675270 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229442 | HR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6896545 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283040 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6197040 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None |
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