ERR9119902
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1034875
|
RR-TB
|
lineage4.1.1.1
|
pt
|
ERR4821689
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2707185
|
RR-TB
|
lineage4.1.1.1
|
cd
|
ERR12544068
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR2101099
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR18289199
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR2101307
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4819651
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2513932
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR2101400
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28044941
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR7363025
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4828811
|
Other
|
lineage4.1.1.1
|
None
|
ERR11044819
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR5918064
|
HR-TB
|
lineage4.1.1.1
|
za
|
ERR9907751
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR9907726
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR11082771
|
MDR-TB
|
lineage4.7
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR4818915
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR13180279
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2514480
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR9907715
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR039326
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2513627
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2446354
|
Sensitive
|
lineage4.1.1.1
|
nl
|
ERR4815507
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2513337
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2514276
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2653207
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2653039
|
Other
|
lineage4.1.1.1
|
None
|
ERR2653068
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR28045950
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13265828
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4813916
|
MDR-TB
|
lineage4.1.1.1
|
br
|
ERR4813830
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR14164698
|
Other
|
lineage4.1.1.1
|
None
|
SRR6896529
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975459
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR4819071
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4872109
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR14164621
|
Other
|
lineage4.1.1.1
|
None
|
ERR8774342
|
RR-TB
|
lineage4.1.1.1
|
None
|
SRR7069886
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR1633794
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4812154
|
Sensitive
|
lineage4.1.1.1
|
pe
|
SRR1172215
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2510322
|
Sensitive
|
lineage4.1.1.1
|
pk
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2512880
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2653034
|
Other
|
lineage4.1.1.1
|
None
|
ERR2516034
|
RR-TB
|
lineage4.1.1.1
|
za
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR29093680
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29231394
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13265113
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR2100255
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4872182
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4872061
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR13286083
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7070231
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10969192
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR7362001
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR2100069
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069925
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21689761
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10969205
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4829059
|
Sensitive
|
lineage4.1.1.1
|
it
|
ERR8975939
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10610349
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR11050230
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9119545
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2513193
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2653042
|
Other
|
lineage4.1.1.1
|
None
|
ERR2706923
|
MDR-TB
|
lineage4.1.1.1;lineage4.1.2;lineage4.3.3
|
cd
|
ERR2653219
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR27450390
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6397599
|
Sensitive
|
lineage4.1.1.1
|
ca
|
ERR495147
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR4872067
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SAMN02403610
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1034966
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR4872249
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9907734
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR10969123
|
Other
|
lineage4.1.1.1
|
None
|
ERR13265345
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR6152712
|
Sensitive
|
lineage4.1.1.1
|
ca
|
ERR234659
|
Other
|
|
None
|
ERR2653038
|
Other
|
lineage4.1.1.1
|
None
|
ERR2653040
|
Other
|
lineage4.1.1.1
|
None
|
SRR29127092
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13093877
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28858504
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975013
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9119824
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR11488957
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4830489
|
MDR-TB
|
lineage4.1.1.1
|
za
|
ERR1034635
|
HR-TB
|
lineage4.1.1.1
|
br
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513937
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR3994110
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815038
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4817429
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4819666
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975883
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR2653231
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR10851648
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR13583450
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR13583351
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR6896158
|
Other
|
lineage4.1.1.1
|
None
|
ERR11044913
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR25827652
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3;lineage4.1.1.1
|
None
|
ERR2653120
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4813896
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6896573
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29096273
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13265737
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR10748519
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR046906
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2512739
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2513757
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2851372
|
Sensitive
|
lineage4.1.1.1
|
lb
|
ERR9786307
|
Sensitive
|
lineage4.1.1.1;lineage4.1.3
|
None
|
ERR9786670
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6650139
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6398055
|
Sensitive
|
lineage4.1.1.1
|
ca
|
ERR4817785
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4818029
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR13261339
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11489022
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR9971172
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4829546
|
Sensitive
|
lineage4.1.1.1
|
it
|
ERR4831056
|
Sensitive
|
lineage4.1.1.1
|
np
|
ERR2202587
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2653019
|
Other
|
lineage4.1.1.1
|
None
|
ERR2653046
|
Other
|
lineage4.1.1.1
|
None
|
ERR2653104
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2653208
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29231786
|
MDR-TB
|
lineage4.1.1.1;lineage4.1.2;lineage4.3.3
|
None
|
ERR9286018
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR495192
|
Other
|
lineage4.1.1.1
|
None
|
ERR9786130
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1169244
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR7764432
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR7069807
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4011981
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29094089
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR29093198
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4020198
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4821026
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR24799231
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4820172
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4817798
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4816166
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4423690
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR4872125
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9907775
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4812840
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1173312
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR6982029
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR7764395
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21689520
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975978
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11067226
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6982295
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2514557
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR16370455
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR2513642
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9786630
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9786455
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069711
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4830281
|
Other
|
lineage4.1.1.1
|
vn
|
ERR4423524
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR10748293
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR3561977
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29093531
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR3957927
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR12544214
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4816239
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR553002
|
MDR-TB
|
lineage4.1.1.1
|
sz
|
SRR18914187
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4813893
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR5535891
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6325453
|
Other
|
lineage4.1.1.1
|
us
|
SRR7069274
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21677937
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3957924
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR6362606
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR4821280
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR8975589
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.1.1
|
None
|
ERR2653235
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7069590
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069865
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6981965
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7069882
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4809196
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR3957932
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9285841
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1165671
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9786488
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1165218
|
MDR-TB
|
lineage2.2.2;lineage4.1.1.1
|
None
|
ERR4797010
|
Sensitive
|
lineage4.1.1.1
|
in
|
ERR13291207
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR2101388
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR551456
|
MDR-TB
|
lineage4.1.1.1
|
sz
|
ERR13265329
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR13591363
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR12931777
|
Other
|
lineage4.1.1.1
|
None
|
ERR5918038
|
Sensitive
|
lineage4.1.1.1
|
za
|
SRR13591442
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2027302
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28859611
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10748339
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7070189
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29093657
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR28046359
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28351341
|
Other
|
lineage4.1.1.1
|
None
|
SRR28044341
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR28046075
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069230
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2653124
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR2513795
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2512559
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR5917993
|
Pre-XDR-TB
|
lineage4.1.1.1
|
za
|
ERR13288856
|
RR-TB
|
lineage4.1.1.1
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR13288827
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13288913
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR13289259
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR7362000
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4423754
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR13291224
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29126176
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29126621
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29126862
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29440889
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29772469
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4816344
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4816422
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR13289896
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4821515
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR9992818
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR9992849
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR1165693
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR2101617
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21677885
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6152665
|
HR-TB
|
lineage4.1.1.1
|
ca
|
SRR28393605
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR13290138
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4816847
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4821890
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9895322
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1167340
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9119581
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9119934
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7070309
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR12931687
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9907684
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR10869011
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21677868
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1165724
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1167173
|
MDR-TB
|
lineage2.2.2;lineage4.1.1.1
|
None
|
SRR6398071
|
Sensitive
|
lineage4.1.1.1
|
ca
|
ERR4423691
|
RR-TB
|
lineage4.1.1.1
|
None
|
SRR14520116
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4816217
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1169225
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4817878
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1173505
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4820112
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR551897
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7069293
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29056006
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR2515472
|
Sensitive
|
lineage4.1.1.1
|
za
|
SRR22251056
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29096721
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29096581
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR13285177
|
MDR-TB
|
lineage4.7
|
None
|
ERR13093921
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29231746
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29052848
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13260797
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29831042
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815424
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR6650243
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9030272
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9119583
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR553001
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1165652
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR6544657
|
HR-TB
|
lineage4.1.1.1
|
None
|
SAMN02403603
|
MDR-TB
|
lineage4.1.1.1
|
za
|
SAMN02403602
|
Pre-XDR-TB
|
lineage4.1.1.1
|
za
|
ERR2514241
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR1173638
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4423753
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR2652919
|
Sensitive
|
lineage4.1.1.1
|
None
|
SAMN02403574
|
MDR-TB
|
lineage4.1.1.1
|
za
|
SRR2101788
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21675634
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9121325
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2202586
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR26112055
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4821200
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR1035256
|
Sensitive
|
lineage4.1.1.1
|
pt
|
ERR495201
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR11465880
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3957938
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9285866
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11488936
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR3086371
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4814492
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR8975111
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6896247
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13093821
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6045810
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR29093815
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2653015
|
Other
|
lineage4.1.1.1
|
None
|
SRR9971226
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4815073
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4011990
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9806822
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4817065
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR11488785
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9787003
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975140
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815329
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR10969178
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR046912
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2200039
|
Sensitive
|
lineage4.1.1.1
|
sz
|
ERR13093880
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR13583436
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2514623
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR6982371
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR400389
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4797465
|
Sensitive
|
lineage4.1.1.1
|
in
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR2199768
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2514439
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4819518
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR495064
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11465454
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR7069624
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6855946
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9806989
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR11488392
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR161036
|
Sensitive
|
lineage4.1.1.1
|
mw
|
SRR27450336
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2653165
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR14164652
|
Other
|
lineage4.1.1.1
|
None
|
SRR6982011
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11465514
|
MDR-TB
|
lineage4.1.1.1
|
None
|
DRR184665
|
Sensitive
|
lineage4.1.1.1
|
vn
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1169283
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR2512883
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2512861
|
Sensitive
|
lineage2.2.1;lineage4.1.1.1
|
gb
|
ERR8025617
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4812193
|
Sensitive
|
lineage4.1.1.1
|
pe
|
SRR6046410
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR10748553
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7070498
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815087
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR25827468
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.1.1.1
|
None
|
ERR279533
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1167369
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR553182
|
HR-TB
|
lineage4.1.1.1
|
sz
|
ERR1035018
|
HR-TB
|
lineage4.1.1.1
|
za
|
SRR10851722
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11465700
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4815897
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR10748184
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR2935863
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR21658754
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9907718
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR11349189
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4553738
|
MDR-TB
|
|
None
|
SRR28044919
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13093937
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29016789
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR9807028
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11488938
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR25827496
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR7069437
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2653144
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR1034981
|
MDR-TB
|
lineage4.1.1.1
|
za
|
ERR1035003
|
MDR-TB
|
lineage4.1.1.1
|
za
|
ERR4819311
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4821234
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR3085298
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4821357
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2653057
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9806871
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR9119473
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2513060
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR3724755
|
Other
|
lineage4.1.1.1
|
cd
|
ERR046731
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975735
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28170690
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR7764407
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR12311942
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR7535072
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11488712
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR1633837
|
Other
|
lineage4.1.1.1
|
za
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR13288829
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR4816428
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4817373
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4821037
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR10610347
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR2707116
|
RR-TB
|
lineage4.1.1.1
|
cd
|
SRR21676407
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28046139
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR28351560
|
Sensitive
|
lineage3;lineage4.1.1.1
|
None
|
SRR6046837
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR28351177
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR1169170
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1633918
|
HR-TB
|
lineage4.1.1.1
|
za
|
SRR7070578
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29081596
|
RR-TB
|
lineage4.1.1.1
|
None
|
SRR29231003
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR10748450
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR1664620
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR7911701
|
Pre-XDR-TB
|
lineage4.1.1.1
|
za
|
ERR8975023
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1172081
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1172887
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6896239
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975575
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR9119580
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9786232
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29093600
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR7361912
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2515141
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4423525
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR117693
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28381191
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4808882
|
RR-TB
|
lineage4.1.1.1
|
za
|
SRR26056417
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11050229
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13093854
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29016796
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29052809
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13289622
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR1035004
|
MDR-TB
|
lineage4.1.1.1
|
za
|
SRR2101690
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR10748103
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4818824
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2515836
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR9807017
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4814944
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4816568
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2653073
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR13583445
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR9786241
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9786518
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6045409
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR13591388
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6650422
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6982037
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069104
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6982359
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13093819
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13265838
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9786483
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9787002
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4817063
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SAMN02599183
|
Sensitive
|
lineage4.1.1.1
|
in
|
ERR551166
|
Pre-XDR-TB
|
lineage4.1.1.1
|
sz
|
ERR5987384
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR22251760
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4819196
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4800336
|
Sensitive
|
lineage4.1.1.1
|
in
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR2100093
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9806929
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR12708377
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR2653093
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR11488901
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR10748455
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2514057
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR9119607
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4818256
|
Other
|
lineage4.1.1.1
|
None
|
ERR4797229
|
Sensitive
|
lineage4.1.1.1
|
in
|
SRR3724816
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21657214
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13259977
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4820692
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR1165707
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR9993168
|
XDR-TB
|
lineage4.1.1.1
|
None
|
ERR7361921
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR7911616
|
Pre-XDR-TB
|
lineage4.1.1.1
|
za
|
SRR1165310
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4423727
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9119318
|
Other
|
lineage4.1.1.1
|
None
|
SRR1169313
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR1169195
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR6397595
|
Sensitive
|
lineage4.1.1.1
|
ca
|
SRR6044971
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR1169145
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR552273
|
Pre-XDR-TB
|
lineage4.1.1.1
|
sz
|
SRR3675474
|
Other
|
lineage4.1.1.1
|
None
|
ERR4809233
|
RR-TB
|
lineage4.1.1.1
|
za
|
ERR13265627
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4817534
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR046916
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR5987431
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR10969120
|
Sensitive
|
lineage4.1.1.1;lineage4.3.4.1
|
None
|
ERR10969212
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21689643
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9119641
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11488650
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2200045
|
Sensitive
|
lineage4.1.1.1
|
sz
|
ERR4830486
|
MDR-TB
|
lineage4.1.1.1
|
za
|
ERR4872213
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR552456
|
Pre-XDR-TB
|
lineage4.1.1.1
|
sz
|
ERR1035068
|
MDR-TB
|
lineage4.1.1.1
|
za
|
SRR12708410
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR6964585
|
Other
|
lineage4.1.1.1
|
None
|
SRR26111907
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR14164799
|
Other
|
lineage4.1.1.1
|
None
|
ERR4814703
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR10748105
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4809086
|
Sensitive
|
lineage4.1.1.1
|
za
|
SRR6045480
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR1035273
|
MDR-TB
|
lineage4.1.1.1
|
br
|
ERR4809118
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR2514900
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9285944
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21239868
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9806689
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR18213969
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29094405
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR26112122
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13289949
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4011998
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR10796620
|
Other
|
lineage4.1.1.1
|
None
|
SRR1167281
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR072100
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10610141
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR6362913
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1664655
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1035189
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4819718
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR7911455
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR9907683
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR553151
|
Sensitive
|
lineage4.1.1.1
|
cg
|
ERR2653024
|
Other
|
lineage4.1.1.1
|
None
|
SRR2100910
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10969179
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29096439
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069328
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069630
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4819889
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR9971091
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR21662805
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR28044359
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4195764
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR9899669
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4817239
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR039325
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4819880
|
Other
|
lineage4.1.1.1
|
None
|
ERR9907803
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9119758
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9285832
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR7911643
|
Pre-XDR-TB
|
lineage4.1.1.1
|
za
|
ERR1555051
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR13591459
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815494
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4819293
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4821670
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR330661
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR2469376
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR8975457
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR275232
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2514041
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2512960
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR1169196
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11049480
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29056129
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1034625
|
Other
|
lineage4.1.1.1;lineage4.1.2
|
br
|
ERR2653213
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR21689979
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28046006
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR28393346
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7069935
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR278523
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3287325
|
Sensitive
|
lineage4.1.1.1
|
pe
|
ERR2935860
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29055998
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR22251984
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9786118
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1172177
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR1172774
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR552710
|
Pre-XDR-TB
|
lineage4.1.1.1
|
sz
|
ERR9119531
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4407483
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3994104
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7645965
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2660418
|
Other
|
lineage4.1.1.1
|
None
|
ERR279494
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069190
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR023254
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR495025
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9806963
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR7069641
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR9224921
|
Other
|
lineage4.1.1.1
|
None
|
ERR11081523
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR2200067
|
Sensitive
|
lineage4.1.1.1
|
sz
|
ERR12311987
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR12268416
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR7737808
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR8975072
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4020197
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR13289286
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4872141
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4872183
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4872185
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR6544658
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR2514611
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR21732408
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11068270
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4809145
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR108152
|
Sensitive
|
lineage4.1.1.1
|
za
|
SRR1165672
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2707080
|
MDR-TB
|
lineage4.1.1.1
|
cd
|
ERR2653050
|
Other
|
lineage4.1.1.1
|
None
|
ERR9119612
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR2101486
|
Other
|
lineage4.1.1.1
|
None
|
ERR2653041
|
Other
|
lineage4.1.1.1
|
None
|
ERR400457
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR8774343
|
RR-TB
|
lineage4.1.1.1
|
None
|
SAMN02403499
|
MDR-TB
|
lineage4.1.1.1
|
za
|
SRR18213752
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR551896
|
MDR-TB
|
lineage4.1.1.1
|
sz
|
ERR4816999
|
Other
|
|
None
|
ERR4800538
|
Sensitive
|
lineage4.1.1.1
|
in
|
ERR12015088
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4818201
|
HR-TB
|
lineage4.1.1.1
|
gb
|
ERR4809090
|
Sensitive
|
lineage4.1.1.1
|
za
|
ERR9119935
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR553073
|
Sensitive
|
lineage4.1.1.1
|
cg
|
ERR8975472
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR2514972
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2513303
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR12931709
|
Other
|
lineage4.1.1.1
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
ERR2513560
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR2514561
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR9285917
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11488493
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4814408
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11489017
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR13591343
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29231828
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR8975451
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4814519
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4813934
|
RR-TB
|
lineage4.1.1.1
|
br
|
SRR27450563
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR3725679
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6896343
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11775990
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR553074
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR29093300
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR22249525
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11488535
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11489025
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR13289826
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2514108
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4818532
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR234223
|
Sensitive
|
lineage4.1.1.1
|
us
|
ERR2515409
|
MDR-TB
|
lineage4.1.1.1
|
za
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4819601
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR7069493
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13266311
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR2512387
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR12015087
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1165681
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29016782
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29053242
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR14164542
|
Other
|
lineage4.1.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR3086369
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4819747
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10748095
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR6544664
|
Other
|
lineage4.1.1.1;lineage4.1.2
|
None
|
ERR4817068
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29231066
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13266493
|
Sensitive
|
lineage3.1.3;lineage4.1.1.1
|
None
|
ERR2513824
|
Sensitive
|
lineage4.1.1.1
|
gb
|
SRR22250138
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR10315487
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR2101700
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9907736
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2653056
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR7764327
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6046389
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4809220
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6397676
|
Sensitive
|
lineage4.1.1.1
|
ca
|
ERR4814013
|
Sensitive
|
lineage4.1.1.1
|
br
|
ERR11641192
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13265711
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR13583511
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR21677946
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6896388
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4817304
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR11049414
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13266008
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8975390
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR10851737
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR11465456
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4809213
|
Sensitive
|
lineage4.1.1.1
|
za
|
SRR1165722
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR8975580
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR29126821
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6046763
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4818259
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR13093825
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4829334
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10748178
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR8975074
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815381
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4818601
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR12708408
|
Other
|
lineage4.1.1.1
|
None
|
ERR2515995
|
MDR-TB
|
lineage4.1.1.1
|
za
|
ERR10748149
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR9285891
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR12931756
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4820699
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR4822043
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4815561
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR13583341
|
HR-TB
|
lineage4.1.1.1
|
None
|
SRR6046387
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR9992851
|
XDR-TB
|
lineage4.1.1.1
|
None
|
ERR8975011
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4813638
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29772389
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR4814284
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3085300
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR13591403
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10748302
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1664645
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR5918112
|
MDR-TB
|
lineage4.1.1.1
|
za
|
SRR1165656
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR6397537
|
Sensitive
|
lineage4.1.1.1
|
ca
|
ERR12544229
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR3994095
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3275257
|
Sensitive
|
lineage4.1.1.1
|
nl
|
ERR4822192
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4819319
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR4812402
|
Sensitive
|
lineage4.1.1.1
|
pe
|
SRR7069506
|
Other
|
lineage4.1.1.1;lineage4.1.2
|
None
|
ERR8975617
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR4872218
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR9786826
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR13093839
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR8479580
|
Other
|
lineage1.2.2.1;lineage4.1.1.1
|
None
|
SRR12931774
|
Other
|
lineage4.1.1.1
|
None
|
SRR29093551
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR29231062
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR15364433
|
Pre-XDR-TB
|
lineage4.1.1.1
|
None
|
ERR4012003
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR25827450
|
MDR-TB
|
lineage3;lineage4.1.1.1
|
None
|
SRR1173246
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1167358
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR3675544
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR3957930
|
Other
|
lineage4.1.1.1
|
None
|
SRR9971252
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR8975055
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR9119515
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR7070207
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR386882
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR3994127
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR046931
|
Sensitive
|
lineage4.1.1.1
|
None
|
SAMN02403575
|
Pre-XDR-TB
|
lineage4.1.1.1
|
za
|
ERR10969116
|
HR-TB
|
lineage4.1.1.1
|
None
|
ERR8975384
|
Sensitive
|
lineage4.1.1.1
|
None
|
ERR10969243
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|