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SRA data
Rv2428
- c.18T>C
Drug resistance types
440 Sensitive
25 RR-TB
84 HR-TB
194 MDR-TB
56 Pre-XDR-TB
2 XDR-TB
58 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.1.1
802
4
lineage2.1;lineage4.9
4
lineage2.2.1;lineage4.1.1.1
4
lineage4.1.1.1;lineage4.1.2
3
La3;M.canetti;lineage2.1;lineage4.9
3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
3
lineage3;lineage4.1.1.1
3
M.canetti;lineage2.1;lineage4.9
2
lineage4.7
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
859
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR184665
Sensitive
lineage4.1.1.1
vn
ERR023254
Sensitive
lineage4.1.1.1
None
ERR039325
Sensitive
lineage4.1.1.1
gb
ERR039326
Sensitive
lineage4.1.1.1
gb
ERR046731
Sensitive
lineage4.1.1.1
None
ERR046906
Sensitive
lineage4.1.1.1
gb
ERR046912
Sensitive
lineage4.1.1.1
gb
ERR046916
Sensitive
lineage4.1.1.1
gb
ERR046931
Sensitive
lineage4.1.1.1
None
ERR072100
Sensitive
lineage4.1.1.1
None
Showing 1 to 10 of 859 entries
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