lineage | Count |
---|---|
60 | |
lineage3 | 1 |
lineage4.9 | 9 |
lineage2.2.1 | 4 |
lineage3.1.3 | 1 |
lineage2.2 | 3 |
La2 | 1 |
lineage4 | 2 |
lineage3.1.2 | 1 |
lineage4.3.3 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675270 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | ERR2514692 | Other | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | ERR2693254 | Other | None | ERR2693231 | Other | None | ERR2652957 | Sensitive | lineage4.9 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2693230 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR4827733 | Sensitive | lineage3.1.3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045327 | HR-TB | None | SRR6045233 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045399 | Other | None | ERR502889 | Other | None | SRR6046225 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR133986 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3283025 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR4798406 | HR-TB | None | ERR3797061 | Other | None | ERR4769450 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR7911359 | HR-TB | lineage4.3.3 | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR736835 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR13232409 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None |
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