Rv3806c - p.Val188Ala
Drug resistance types
16 Sensitive
0 RR-TB
59 HR-TB
21 MDR-TB
167 Pre-XDR-TB
4 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| 48 | |
| lineage4.3.3 | 167 |
| lineage4.8 | 3 |
| lineage2.2.1 | 15 |
| lineage4.3.3;lineage3.1.1 | 2 |
| lineage4 | 11 |
| lineage1.1 | 1 |
| lineage4.3.3;lineage2.2.1 | 2 |
| lineage4.9 | 11 |
| lineage3.1 | 2 |
| lineage2.2.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 2 |
| La1 | 1 |
| La1.8.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.3;lineage4.3.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 281 |
Geographic prevalence
Country level data for this variant is available for 102 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675545 | HR-TB | None | SRR9970987 | Pre-XDR-TB | lineage4.3.3 | None | SRR6045952 | HR-TB | None | SRR6325444 | HR-TB | None | SRR847791 | Pre-XDR-TB | lineage4.3.3 | za | SRR9970994 | Pre-XDR-TB | lineage4.3.3 | None | ERR278594 | HR-TB | None | ERR4828910 | MDR-TB | lineage4.8 | None | ERR4830515 | Pre-XDR-TB | lineage4.3.3 | za | ERR2446563 | Other | lineage2.2.1 | nl | ERR4830554 | Pre-XDR-TB | lineage4.3.3 | None | ERR4830557 | Pre-XDR-TB | lineage4.3.3 | None | ERR4828787 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829041 | Pre-XDR-TB | lineage2.2.1 | it | ERR4830506 | Pre-XDR-TB | lineage4.3.3 | za | ERR4830524 | Pre-XDR-TB | lineage4.3.3 | za | ERR3275196 | Other | lineage2.2.1 | nl | ERR4828774 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828779 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830469 | Pre-XDR-TB | lineage4.3.3 | za | ERR4829823 | Pre-XDR-TB | lineage2.2.1 | it | ERR7361975 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586041 | Pre-XDR-TB | lineage4.3.3 | za | ERR9119096 | Other | lineage4.3.3 | None | SAMN02403467 | Pre-XDR-TB | lineage4.3.3 | za | ERR7737750 | MDR-TB | lineage4.3.3 | None | ERR8975821 | XDR-TB | lineage4.3.3 | None | SRR1062825 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586076 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586084 | Pre-XDR-TB | lineage4.3.3 | za | SRR1011474 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315627 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315655 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184301 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175081 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184382 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173518 | Pre-XDR-TB | lineage4.3.3;lineage3.1.1 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR6325448 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR833064 | Pre-XDR-TB | lineage4.3.3 | None | SRR6325442 | HR-TB | None | SRR9970990 | Pre-XDR-TB | lineage4.3.3 | None | SRR847777 | Pre-XDR-TB | lineage4.3.3 | za | SRR924213 | Pre-XDR-TB | lineage4.3.3 | None | SRR833099 | MDR-TB | lineage4.3.3 | None | ERR4831550 | Pre-XDR-TB | lineage4.3.3 | None | ERR3077978 | Other | lineage1.1 | None | ERR3132265 | MDR-TB | lineage4.3.3 | None | ERR323036 | HR-TB | None | ERR4831509 | Pre-XDR-TB | lineage2.2.1 | pk | ERR4831538 | Pre-XDR-TB | lineage4.3.3;lineage2.2.1 | None | ERR7361962 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831575 | Pre-XDR-TB | lineage4.3.3 | None | ERR6866410 | Sensitive | None | ERR8975698 | Pre-XDR-TB | lineage4.3.3 | None | ERR7737634 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911566 | Pre-XDR-TB | lineage4.3.3 | za | ERR7737921 | MDR-TB | lineage4.3.3 | None | SRR1062822 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350430 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053773 | Pre-XDR-TB | lineage4.3.3 | za | SRR1062839 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR10808805 | Sensitive | None | SRR1175065 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172869 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173789 | Pre-XDR-TB | lineage4.3.3;lineage3.1.1 | None | SRR6046514 | HR-TB | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR294248 | HR-TB | None | SRR6981952 | MDR-TB | lineage4.3.3 | None | SRR847792 | Pre-XDR-TB | lineage4.3.3 | za | SRR832996 | Pre-XDR-TB | lineage4.3.3 | None | SRR847779 | Pre-XDR-TB | lineage4.3.3 | za | SRR833191 | Pre-XDR-TB | lineage4.3.3 | None | ERR5311090 | HR-TB | None | SRR924219 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971227 | Pre-XDR-TB | lineage4.3.3 | None | ERR502510 | Sensitive | lineage4 | None | SRR924231 | Pre-XDR-TB | lineage4.3.3 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR6358837 | HR-TB | None | ERR7737731 | MDR-TB | lineage4.3.3 | None | ERR7361959 | Pre-XDR-TB | lineage4.3.3 | None | ERR9992695 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993119 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350411 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403569 | Pre-XDR-TB | lineage4.3.3 | za | SRR10315604 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586066 | Pre-XDR-TB | lineage4.3.3 | za | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1019172 | Pre-XDR-TB | lineage4.3.3 | None | SRR1062840 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173276 | Pre-XDR-TB | lineage4.3.3 | None | SRR1165698 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173101 | Pre-XDR-TB | lineage4.3.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR323038 | HR-TB | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR10748177 | Pre-XDR-TB | lineage4.3.3 | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR040123 | MDR-TB | lineage3.1.2.1 | ug | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034984 | Pre-XDR-TB | lineage4.3.3 | za | ERR10748074 | Pre-XDR-TB | lineage4.3.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283017 | HR-TB | None | ERR10748187 | Pre-XDR-TB | lineage4.3.3 | None | ERR108471 | HR-TB | lineage4 | None | ERR11043123 | MDR-TB | lineage2.2.1 | None | ERR1193881 | Pre-XDR-TB | lineage4.3.3 | za | ERR11043156 | MDR-TB | lineage4.8 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283032 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797064 | Sensitive | None | ERR4188350 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4808975 | Pre-XDR-TB | lineage4.3.3 | None | ERR473327 | Pre-XDR-TB | lineage4.3.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4799775 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4808877 | Pre-XDR-TB | lineage4.3.3 | za | ERR4809290 | Pre-XDR-TB | lineage4.3.3 | za | ERR4808988 | Pre-XDR-TB | lineage4.3.3 | za | SRR833105 | Pre-XDR-TB | lineage4.3.3 | za | ERR4810624 | HR-TB | lineage2.2 | None | SAMN02586018 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02403621 | Pre-XDR-TB | lineage4.3.3 | za | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SAMN01828243 | Pre-XDR-TB | lineage4.3.3 | za | ERR161033 | HR-TB | None | SAMN02350427 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586104 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975819 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02053760 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975515 | Pre-XDR-TB | lineage4.3.3 | None | SRR1640750 | Other | None | ERR7911627 | Pre-XDR-TB | lineage4.3.3;lineage2.2.1 | za | SAMN02403568 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586081 | Pre-XDR-TB | lineage4.3.3 | za | SRR847794 | Pre-XDR-TB | lineage4.3.3 | za | SRR833173 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350433 | Pre-XDR-TB | lineage4.3.3 | za | SRR847794_SRR924220 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350426 | Pre-XDR-TB | lineage4.3.3 | za | SRR833059 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925663 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02053781 | MDR-TB | lineage4.3.3 | za | ERR4816964 | Other | lineage4.9 | None | ERR1949956 | Sensitive | lineage4.8 | None | SRR6397654 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR8975080 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586068 | Pre-XDR-TB | lineage4.3.3 | za | SRR847800 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02585959 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586073 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586080 | Pre-XDR-TB | lineage4.3.3 | za | SRR833086 | Pre-XDR-TB | lineage4.3.3 | za | SRR847778 | Pre-XDR-TB | lineage4.3.3 | za | SRR833115 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925619 | Pre-XDR-TB | lineage4.3.3 | za | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR8975018 | XDR-TB | lineage4.3.3 | None | ERR7911687 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350413 | Pre-XDR-TB | lineage4.3.3 | za | SAMN01925634 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586087 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350421 | Pre-XDR-TB | lineage4.3.3 | za | SRR2101539 | MDR-TB | lineage4.3.3 | None | SAMN02350416 | Pre-XDR-TB | lineage4.3.3 | za | SRR6325447 | HR-TB | None | ERR2510693 | Pre-XDR-TB | lineage2.2.1 | it | SRR847778_SRR924219 | Pre-XDR-TB | lineage4.3.3 | None | ERR2510694 | Pre-XDR-TB | lineage2.2.1 | it | SRR847789 | Pre-XDR-TB | lineage4.3.3 | za | ERR2510849 | Pre-XDR-TB | lineage2.2.1 | it | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR5918042 | Pre-XDR-TB | lineage4.3.3 | za | SRR833078 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586079 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350422 | Pre-XDR-TB | lineage4.3.3 | za | ERR2229143 | Other | lineage4.1.1 | None | SRR833058 | Pre-XDR-TB | lineage4.3.3 | za | SRR847776 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586074 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350425 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586017 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586070 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350431 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586090 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350415 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350412 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515319 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515344 | Pre-XDR-TB | lineage4.3.3 | za | SRR833077 | Pre-XDR-TB | lineage4.3.3 | za | ERR2510321 | Pre-XDR-TB | lineage2.2.1 | pk | ERR2510361 | Pre-XDR-TB | lineage2.2.1 | pk | SRR847785 | Pre-XDR-TB | lineage4.3.3 | za | SAMEA2534676 | MDR-TB | lineage2.2.1 | kz | SAMN02053766 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515622 | Pre-XDR-TB | lineage4.3.3;lineage4.3.2.1 | za | ERR2515682 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515754 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515776 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350429 | Pre-XDR-TB | lineage4.3.3 | za | SRR847796 | Pre-XDR-TB | lineage4.3.3 | za | SRR847779_SRR924227 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02585981 | Pre-XDR-TB | lineage4.3.3 | za | SRR847787 | Pre-XDR-TB | lineage4.3.3 | za | ERR4819933 | Other | lineage4.9 | None | SAMN02350417 | Pre-XDR-TB | lineage4.3.3 | za | ERR2515175 | Pre-XDR-TB | lineage4.3.3 | za | SRR847788 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02350414 | Pre-XDR-TB | lineage4.3.3 | za | SAMN02586069 | Pre-XDR-TB | lineage4.3.3 | za | SRR23339947 | MDR-TB | lineage4.3.3 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975605 | MDR-TB | lineage4.3.3 | None | SRR847783 | Pre-XDR-TB | lineage4.3.3 | za | ERR2693239 | HR-TB | None | SRR23340085 | MDR-TB | lineage4.3.3 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5918119 | Pre-XDR-TB | lineage4.3.3 | za | ERR8975004 | Pre-XDR-TB | lineage4.3.3 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1011456 | Pre-XDR-TB | lineage4.3.3 | None | ERR8975982 | XDR-TB | lineage4.3.3 | None | ERR9992999 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02586065 | Pre-XDR-TB | lineage4.3.3 | za | SRR1011472 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315684 | Pre-XDR-TB | lineage4.3.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173780 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349167 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172739 | Pre-XDR-TB | lineage4.3 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1180293 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180379 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181376 | Pre-XDR-TB | lineage4.3.3 | None |
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