Rv3806c - p.Val188Ala


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
8 Sensitive 5 RR-TB 60 HR-TB 73 MDR-TB 412 Pre-XDR-TB 25 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.3.3 426
M.canetti;lineage2.1;lineage4.9 21
lineage2.2.1 29
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.3.3;lineage4.4.1.1.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.9 1
M.canetti;lineage2.2 1
lineage4.9 12
lineage4.1.1.3 3
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.2.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage3.1.1;lineage4.3.3 4
lineage4.3.3;lineage4.4.1.1 2
lineage4.3.2.1;lineage4.3.3 1
lineage4.9.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
lineage4.3.2;lineage4.3.3 1
lineage2.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1 1
lineage4.4.1.2 1
La1.8.1 1
lineage4.8 4
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.3.1 1
lineage4.1.1;lineage4.9 1
lineage3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;lineage4.9;lineage7 1
lineage4.4.1.1.1 1
lineage2.2.1;lineage4.3.3 3
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage3.1.2.1 2
lineage4.3.4.1 3
lineage4.5 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4 1
lineage4.1.1.1 1
La1.7.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.2.1 2
lineage4.3.2.1 1
lineage4.2;lineage4.9 1
lineage2;lineage4.3.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.2;lineage4.3.3 1
M.canetti;lineage2.1;lineage4 1
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
spoligotype Counts
spoligotype Count
None 595
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR13289260 Pre-XDR-TB lineage4.3.3 None
ERR7361988 Pre-XDR-TB lineage4.3.3 None
ERR13286214 Pre-XDR-TB lineage4.3.3 None
ERR13286043 Pre-XDR-TB lineage4.3.3 None
ERR13289393 Pre-XDR-TB lineage4.3.3 None
ERR13286042 Pre-XDR-TB lineage4.3.3 None
ERR9992871 XDR-TB lineage4.3.3 None
ERR13288794 Pre-XDR-TB lineage4.3.3 None
SRR1181220 Pre-XDR-TB lineage4.3.3 None
ERR13288988 MDR-TB lineage4.3.3 None
SRR1196477 Pre-XDR-TB lineage4.3.3 None
SRR1165698 Pre-XDR-TB lineage4.3.3 None
ERR2515754 Pre-XDR-TB lineage4.3.3 za
SAMN01925651 Pre-XDR-TB lineage4.3.3 None
ERR11488574 Pre-XDR-TB lineage4.3.3 None
ERR8025610 Pre-XDR-TB lineage4.3.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181376 Pre-XDR-TB lineage4.3.3 None
ERR8975515 Pre-XDR-TB lineage4.3.3 None
ERR7362014 Pre-XDR-TB lineage4.3.3 None
SRR1062822 Pre-XDR-TB lineage4.3.3 None
ERR4829823 Pre-XDR-TB lineage2.2.1 it
ERR4829041 Pre-XDR-TB lineage2.2.1 it
SRR1167350 Pre-XDR-TB lineage4.3.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR833023 Pre-XDR-TB lineage4.3.3 None
SRR1175081 MDR-TB lineage4.3.3 None
SAMN01925617 Pre-XDR-TB lineage4.3.3 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR847793 Pre-XDR-TB lineage4.3.3 None
SRR1019171 Pre-XDR-TB lineage4.3.3 None
SAMN01925667 Pre-XDR-TB lineage4.3.3 None
SRR1173154 MDR-TB lineage4.3.3;lineage4.4.1.1.1 None
SRR1173039 Pre-XDR-TB lineage4.3.3 None
SRR9970987 Pre-XDR-TB lineage4.3.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196515 Pre-XDR-TB lineage4.3.3 None
SRR1184320 Pre-XDR-TB lineage4.3.3 None
ERR9993123 XDR-TB lineage4.3.3 None
SRR1184378 Pre-XDR-TB lineage4.3.3 None
SAMN02350411 Pre-XDR-TB lineage4.3.3 za
SRR15901693 Pre-XDR-TB lineage2.2.1 None
SAMN01925618 Pre-XDR-TB lineage4.3.3 None
SRR12708418 HR-TB lineage2.2.1 None
SRR1011462 Pre-XDR-TB lineage4.3.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1062834 Pre-XDR-TB lineage4.3.3 None
ERR3797015 HR-TB lineage4.9 None
SRR1180433 Pre-XDR-TB lineage4.3.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR924213 Pre-XDR-TB lineage4.3.3 None
ERR4810624 HR-TB lineage2.2.1 None
ERR7361977 Pre-XDR-TB lineage4.3.3 None
SRR1011467 Pre-XDR-TB lineage4.3.3 None
SRR29093286 Pre-XDR-TB lineage4.3.3 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR9971040 Pre-XDR-TB lineage4.3.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR15901694 Pre-XDR-TB lineage2.2.1 None
ERR8976043 HR-TB lineage2.2 None
SAMN02586074 Pre-XDR-TB lineage4.3.3 None
SRR9971187 Pre-XDR-TB lineage4.3.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1196504 Pre-XDR-TB lineage4.3.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR971389 Sensitive lineage4.9 None
ERR13288743 Pre-XDR-TB lineage4.3.3 None
SRR1062825 Pre-XDR-TB lineage4.3.3 None
SRR1165315 XDR-TB lineage3.1.1;lineage4.3.3 None
SRR10315686 Pre-XDR-TB lineage4.3.3 None
SAMN01925668 Pre-XDR-TB lineage4.3.3 None
SRR9970990 Pre-XDR-TB lineage4.3.3 None
SRR11349177 Pre-XDR-TB lineage4.3.3 None
SRR924230 Pre-XDR-TB lineage4.3.3 None
ERR11043123 MDR-TB lineage2.2.1 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR9806900 Pre-XDR-TB lineage4.3.3 None
SRR924693 Pre-XDR-TB lineage4.3.3;lineage4.4.1.1 None
SRR6855822 Pre-XDR-TB lineage4.3.2.1;lineage4.3.3 None
ERR5311094 HR-TB lineage4.9 None
SRR1181243 Pre-XDR-TB lineage4.3.3 None
SRR3743500 Pre-XDR-TB lineage2.2.1 None
SAMN01925615 Pre-XDR-TB lineage4.3.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11465189 RR-TB lineage4.9.1 None
SRR29096324 Pre-XDR-TB lineage4.3.3 None
SRR924226 Pre-XDR-TB lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR8025683 Pre-XDR-TB lineage4.3.3 None
SRR833137 MDR-TB lineage4.3.3 None
SRR1011470 Pre-XDR-TB lineage4.3.3 None
ERR11488367 Pre-XDR-TB lineage4.3.3 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02350417 Pre-XDR-TB lineage4.3.3 za
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR473327 Pre-XDR-TB lineage4.3.3 None
SRR1173354 Pre-XDR-TB lineage4.3.3 None
SAMN02403569 Pre-XDR-TB lineage4.3.3 za
SAMN02586076 Pre-XDR-TB lineage4.3.3 za
SAMN02585981 Pre-XDR-TB lineage4.3.3 za
SAMN01925639 Pre-XDR-TB lineage4.3.3 None
ERR7361975 Pre-XDR-TB lineage4.3.3 None
SRR1181138 Pre-XDR-TB lineage4.3.3 None
ERR11488368 Pre-XDR-TB lineage4.3.3 None
SRR1184297 Pre-XDR-TB lineage4.3.3 None
ERR11488703 Pre-XDR-TB lineage4.3.3 None
SRR847801 Pre-XDR-TB lineage4.3.3 None
SRR8758885 Pre-XDR-TB lineage4.3.3 None
ERR552479 MDR-TB lineage2.2.1 None
SRR1173200 Pre-XDR-TB lineage4.3.3 None
SRR924216 Pre-XDR-TB lineage4.3.3 None
ERR7737921 MDR-TB lineage4.3.3 None
ERR8025485 Pre-XDR-TB lineage4.3.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165723 Pre-XDR-TB lineage4.3.3 None
SRR1165225 Pre-XDR-TB lineage4.3.3 None
SRR14781842 HR-TB lineage2.2.1 None
ERR13286202 Pre-XDR-TB lineage4.3.3 None
ERR2510849 Pre-XDR-TB lineage2.2.1 it
ERR9992957 XDR-TB lineage4.3.3 None
ERR9992695 XDR-TB lineage4.3.3 None
SRR10315604 Pre-XDR-TB lineage4.3.3 None
ERR9992915 XDR-TB lineage4.3.3 None
ERR9992629 Pre-XDR-TB lineage4.3.3 None
ERR2515622 Pre-XDR-TB lineage4.3.2;lineage4.3.3 za
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR2515682 Pre-XDR-TB lineage4.3.3 za
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2515319 Pre-XDR-TB lineage4.3.3 za
SRR1011463 Pre-XDR-TB lineage4.3.3 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4808988 Pre-XDR-TB lineage4.3.3 za
SRR833115 Pre-XDR-TB lineage4.3.3 za
ERR5918119 Pre-XDR-TB lineage4.3.3 za
SRR847788 Pre-XDR-TB lineage4.3.3 za
ERR8975004 Pre-XDR-TB lineage4.3.3 None
SRR924223 Pre-XDR-TB lineage4.3.3 None
ERR8975080 Pre-XDR-TB lineage4.3.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1062823 Pre-XDR-TB lineage4.3.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR1173518 Pre-XDR-TB lineage3.1.1;lineage4.3.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR833064 Pre-XDR-TB lineage4.3.3 None
SAMN01925636 Pre-XDR-TB lineage4.3.3 None
SRR924215 Pre-XDR-TB lineage4.3.3 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1062828 Pre-XDR-TB lineage4.3.3 None
ERR10748177 Pre-XDR-TB lineage4.3.3 None
ERR552049 MDR-TB lineage4.3.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1165629 Pre-XDR-TB lineage4.3.3 None
SRR25389476 HR-TB lineage2.2.1 None
SRR1173101 Pre-XDR-TB lineage4.3.3 None
ERR11773750 Pre-XDR-TB lineage4.3.3 None
SRR1175487 Sensitive lineage4.9 None
ERR3077978 Other lineage1.1 None
ERR4831550 Pre-XDR-TB lineage4.3.3 None
ERR9806821 Pre-XDR-TB lineage4.3.3 None
SRR1196542 XDR-TB lineage4.3.3 None
SRR924220 Pre-XDR-TB lineage4.3.3 None
ERR11465081 Pre-XDR-TB lineage4.3.3 None
SRR1011455 Pre-XDR-TB lineage4.3.3 None
SRR1181170 Pre-XDR-TB lineage4.3.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11488702 Pre-XDR-TB lineage4.3.3 None
SRR847787 Pre-XDR-TB lineage4.3.3 za
SRR9971051 Pre-XDR-TB lineage4.3.3 None
SRR1062840 Pre-XDR-TB lineage4.3.3 None
SRR1173448 Pre-XDR-TB lineage4.3.3 None
ERR9992647 XDR-TB lineage4.3.3 None
ERR3797023 HR-TB La1.8.1 None
ERR11488483 Pre-XDR-TB lineage4.3.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN01925659 Pre-XDR-TB lineage4.3.3 None
SRR1180441 Pre-XDR-TB lineage4.3.3 None
SAMN01925650 Pre-XDR-TB lineage4.3.3 None
SRR1173349 Pre-XDR-TB lineage4.3.3 None
SRR10315751 MDR-TB lineage4.8 None
SRR1173780 Pre-XDR-TB lineage4.3.3 None
SRR12708392 Other lineage2.2.1 None
SRR1184326 Pre-XDR-TB lineage4.3.3 None
SRR833191 Pre-XDR-TB lineage4.3.3 None
SRR11349135 XDR-TB lineage4.3.3 None
SAMN02585982 MDR-TB lineage4.3.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR1184342 Pre-XDR-TB lineage4.3.3 None
ERR1034984 Pre-XDR-TB lineage4.3.3 za
SAMN01925641 Pre-XDR-TB lineage4.3.3 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11773708 Pre-XDR-TB lineage4.3.3 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR924212 Pre-XDR-TB lineage4.3.3 None
SRR1062846 Pre-XDR-TB lineage4.3.3 None
SRR1062839 Pre-XDR-TB lineage4.3.3 None
SRR1180369 Pre-XDR-TB lineage4.3.3 None
SRR3055714 Pre-XDR-TB lineage4.3.3 None
SRR1175065 Pre-XDR-TB lineage4.3.3 None
ERR11043156 MDR-TB lineage4.8 None
ERR11488588 Pre-XDR-TB lineage4.3.3 None
SRR1181396 Pre-XDR-TB lineage4.3.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7361978 Pre-XDR-TB lineage4.3.3 None
SRR1196536 Pre-XDR-TB lineage4.3.3 None
SRR1144815 Pre-XDR-TB lineage4.3.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR1173142 Pre-XDR-TB lineage4.3.3 None
SRR1184331 Pre-XDR-TB lineage4.3.3 None
ERR9993040 Pre-XDR-TB lineage4.3.3 None
SRR1196576 Pre-XDR-TB lineage4.3.3 None
SRR847777 Pre-XDR-TB lineage4.3.3 za
ERR2510361 Pre-XDR-TB lineage2.2.1 pk
ERR10610199 Pre-XDR-TB lineage4.3.3 None
ERR10748187 Pre-XDR-TB lineage4.3.3 None
SRR1184333 Pre-XDR-TB lineage4.3.3 None
ERR4831509 Pre-XDR-TB lineage2.2.1 pk
ERR9806959 Pre-XDR-TB lineage4.3.3 None
SRR29289234 MDR-TB lineage3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN01925660 Pre-XDR-TB lineage4.3.3 None
ERR7361964 Pre-XDR-TB lineage4.3.3 None
SRR9971227 Pre-XDR-TB lineage4.3.3 None
ERR4831575 Pre-XDR-TB lineage4.3.3 None
ERR11488842 Pre-XDR-TB lineage4.3.3 None
ERR7361984 Pre-XDR-TB lineage4.3.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR13284845 MDR-TB lineage4.8 None
ERR7361995 Pre-XDR-TB lineage4.3.3 None
SRR9971303 Pre-XDR-TB lineage4.3.3 None
SRR1181174 Pre-XDR-TB lineage4.3.3 None
ERR9992615 XDR-TB lineage4.3.3 None
SRR833013 Pre-XDR-TB lineage4.3.3 None
SRR833058 Pre-XDR-TB lineage4.3.3 za
SRR29056339 MDR-TB lineage4.3.3 None
SRR1196575 Pre-XDR-TB lineage4.3.3 None
ERR3283018 HR-TB lineage4.9 None
ERR9806902 Pre-XDR-TB lineage4.3.3 None
SRR924227 Pre-XDR-TB lineage4.3.3 None
SRR1167293 MDR-TB lineage4.4.1.1.1 None
ERR4831538 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
SRR1196503 Pre-XDR-TB lineage4.3.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SAMN01925666 Pre-XDR-TB lineage4.3.3 None
SAMN02350427 Pre-XDR-TB lineage4.3.3 za
SAMN02350413 Pre-XDR-TB lineage4.3.3 za
SAMN01925619 Pre-XDR-TB lineage4.3.3 za
SAMN02350415 Pre-XDR-TB lineage4.3.3 za
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SAMN02350430 Pre-XDR-TB lineage4.3.3 za
SAMN02350426 Pre-XDR-TB lineage4.3.3 za
SAMN02350431 Pre-XDR-TB lineage4.3.3 za
SAMN02350422 Pre-XDR-TB lineage4.3.3 za
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02403568 Pre-XDR-TB lineage4.3.3 za
SRR1173276 XDR-TB lineage4.3.3 None
SRR833029 Pre-XDR-TB lineage4.3.3 None
ERR7361959 Pre-XDR-TB lineage4.3.3 None
ERR11773739 Pre-XDR-TB lineage4.3.3 None
SRR833078 Pre-XDR-TB lineage4.3.3 za
ERR11773740 Pre-XDR-TB lineage4.3.3 None
ERR7911687 Pre-XDR-TB lineage4.3.3 za
ERR5918042 XDR-TB lineage4.3.3 za
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR8975821 XDR-TB lineage4.3.3 None
SRR11349167 Pre-XDR-TB lineage4.3.3 None
SRR1167183 Pre-XDR-TB lineage3.1.1;lineage4.3.3 None
ERR11773709 Pre-XDR-TB lineage4.3.3 None
ERR8975819 Pre-XDR-TB lineage4.3.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9992614 Pre-XDR-TB lineage4.3.3 None
ERR9992908 XDR-TB lineage2.2.1;lineage4.3.3 None
SRR1062844 Pre-XDR-TB lineage4.3.3 None
SRR924206 Pre-XDR-TB lineage4.3.3 None
ERR9992791 XDR-TB lineage4.3.3 None
ERR9993074 Pre-XDR-TB lineage4.3.3 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR9806993 Pre-XDR-TB lineage4.3.3 None
SRR924225 Pre-XDR-TB lineage4.3.3 None
SRR924232 Pre-XDR-TB lineage4.3.3 None
SRR9970994 Pre-XDR-TB lineage4.3.3 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SAMN01925661 Pre-XDR-TB lineage4.3.3 None
SAMN01925634 Pre-XDR-TB lineage4.3.3 za
ERR040123 MDR-TB lineage3.1.2.1 ug
SRR833077 Pre-XDR-TB lineage4.3.3 za
SAMN02350412 Pre-XDR-TB lineage4.3.3 za
SAMN02350421 Pre-XDR-TB lineage4.3.3 za
SAMN02350416 Pre-XDR-TB lineage4.3.3 za
SRR847796 Pre-XDR-TB lineage4.3.3 za
SAMN02350429 Pre-XDR-TB lineage4.3.3 za
SRR847776 Pre-XDR-TB lineage4.3.3 za
SRR847789 Pre-XDR-TB lineage4.3.3 za
SRR847783 Pre-XDR-TB lineage4.3.3 za
SRR847779 Pre-XDR-TB lineage4.3.3 za
SAMN01925663 Pre-XDR-TB lineage4.3.3 za
SAMN02350433 Pre-XDR-TB lineage4.3.3 za
SRR847785 Pre-XDR-TB lineage4.3.3 za
SRR847791 Pre-XDR-TB lineage4.3.3 za
SRR26397810 Pre-XDR-TB lineage4.3.4.1 None
SAMN02585959 Pre-XDR-TB lineage4.3.3 za
SAMN02586017 XDR-TB lineage4.3.3 za
SAMN02586018 Pre-XDR-TB lineage4.3.3 za
SAMN02586041 Pre-XDR-TB lineage4.3.3 za
SRR9971332 Pre-XDR-TB lineage4.3.3 None
SRR1172254 Pre-XDR-TB lineage4.3.3 None
SRR1172869 Pre-XDR-TB lineage4.3.3 None
SRR1181290 Pre-XDR-TB lineage4.3.3 None
SRR1175506 Sensitive lineage4.9 None
SRR21576680 Pre-XDR-TB lineage4.5 None
SAMN02403467 Pre-XDR-TB lineage4.3.3 za
SAMN01925658 Pre-XDR-TB lineage4.3.3 None
SRR833121 Pre-XDR-TB lineage4.3.3 None
SRR833059 Pre-XDR-TB lineage4.3.3 za
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SAMN01925614 Pre-XDR-TB lineage4.3.3 None
SRR833173 Pre-XDR-TB lineage4.3.3 za
SRR5153930 Pre-XDR-TB lineage2.2.1 None
SRR10315625 Pre-XDR-TB lineage4.3.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6981952 MDR-TB lineage4.3.3 None
ERR7737750 MDR-TB lineage4.3.3 None
SRR847778 Pre-XDR-TB lineage4.3.3 za
SRR833099 MDR-TB lineage4.3.3 None
SRR1062824 Pre-XDR-TB lineage4.3.3 None
SRR847800 Pre-XDR-TB lineage4.3.3 za
ERR13284043 MDR-TB lineage2.2.1 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
SRR1172323 Pre-XDR-TB lineage4.3.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173370 MDR-TB lineage4.3.3 None
ERR13267430 Pre-XDR-TB lineage4.3.3 None
SAMN01925640 Pre-XDR-TB lineage4.3.3 None
ERR9806996 Pre-XDR-TB lineage4.3.3 None
SRR29055526 MDR-TB lineage4.3.3 None
SRR924222 Pre-XDR-TB lineage4.3.3 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR1167360 Pre-XDR-TB lineage4.3.3 None
SRR29093616 Pre-XDR-TB lineage4.3.3 None
ERR11080930 Pre-XDR-TB lineage4.1.1.3 None
SRR924231 Pre-XDR-TB lineage4.3.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3085252 Pre-XDR-TB lineage2.2.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29055619 MDR-TB lineage4.3.3 None
SRR23339947 MDR-TB lineage4.3.3 None
SRR1175022 Pre-XDR-TB lineage4.3.3 None
SRR1011454 Pre-XDR-TB lineage4.3.3 None
SRR1011452 Pre-XDR-TB lineage4.3.3 None
SRR1011453 Pre-XDR-TB lineage4.3.3 None
SRR1011457 Pre-XDR-TB lineage4.3.3 None
ERR10748074 Pre-XDR-TB lineage4.3.3 None
ERR7361962 Pre-XDR-TB lineage4.3.3 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173180 Pre-XDR-TB lineage4.3.3 None
ERR7737634 Pre-XDR-TB lineage4.3.3 None
ERR13288915 MDR-TB lineage4.3.3 None
ERR1063846 HR-TB lineage4.9 None
SRR1173024 Sensitive lineage4.3.3 None
ERR9806901 Pre-XDR-TB lineage4.3.3 None
SRR1169212 Pre-XDR-TB lineage4.3.3 None
SRR29055678 Pre-XDR-TB lineage4.3.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1181391 Pre-XDR-TB lineage4.3.3 None
SRR28170781 MDR-TB lineage2.2.1 None
ERR9993119 Pre-XDR-TB lineage4.3.3 None
SRR11349152 XDR-TB lineage4.3.3 None
ERR3132265 MDR-TB lineage4.3.3 None
SRR833024 Pre-XDR-TB lineage4.3.3 None
SRR10315583 Pre-XDR-TB lineage4.3.3 None
ERR13288921 Pre-XDR-TB lineage4.3.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR9971039 XDR-TB lineage4.3.3 None
SRR1173560 Pre-XDR-TB lineage4.3.3 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR13289280 Pre-XDR-TB lineage4.3.3 None
SRR1165660 Pre-XDR-TB lineage4.3.3 None
SRR1183043 Pre-XDR-TB lineage4.3.3 None
ERR4828774 Pre-XDR-TB lineage2.2.1 None
SRR1011458 Pre-XDR-TB lineage4.3.3 None
SRR1181357 Pre-XDR-TB lineage4.3.3 None
SRR924697 Pre-XDR-TB lineage4.3.3 None
SRR1181349 Sensitive lineage4 None
SRR1196530 Pre-XDR-TB lineage4.3.3 None
SRR924214 Pre-XDR-TB lineage4.3.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1011456 Pre-XDR-TB lineage4.3.3 None
SRR847792 Pre-XDR-TB lineage4.3.3 za
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR833125 Pre-XDR-TB lineage4.3.3 None
SRR6325447 HR-TB lineage4.1.1.1 None
SAMN02053807 Pre-XDR-TB lineage4.3.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SAMN02350414 Pre-XDR-TB lineage4.3.3 za
ERR8025486 Pre-XDR-TB lineage4.3.3 None
SRR10315653 Pre-XDR-TB lineage4.3.3 None
SRR7240492 HR-TB La1.7.1 None
SRR1180301 Pre-XDR-TB lineage4.3.3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR9970995 XDR-TB lineage4.3.3 None
SRR1173391 Pre-XDR-TB lineage4.3.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR14782129 MDR-TB lineage4.2.1 None
SRR1173561 Pre-XDR-TB lineage4.3.3 None
ERR2510321 Pre-XDR-TB lineage2.2.1 pk
ERR13285091 Pre-XDR-TB lineage4.1.1.3 None
SRR1011468 Pre-XDR-TB lineage4.3.3 None
ERR4799775 Pre-XDR-TB lineage3.1.2.1 None
SRR9971123 Pre-XDR-TB lineage4.3.3 None
SRR832991 Pre-XDR-TB lineage4.3.3 None
SAMN02350425 Pre-XDR-TB lineage4.3.3 za
SAMN02403621 Pre-XDR-TB lineage4.3.3 za
SRR924228 Pre-XDR-TB lineage4.3.3 None
SAMN02586073 Pre-XDR-TB lineage4.3.3 za
SRR924234 Pre-XDR-TB lineage4.3.3 None
SRR1019172 Pre-XDR-TB lineage4.3.3 None
ERR11773725 Pre-XDR-TB lineage4.3.3 None
ERR4808877 Pre-XDR-TB lineage4.3.3 za
SRR1175325 Pre-XDR-TB lineage4.3.3 None
SRR28498400 Pre-XDR-TB lineage4.2.1 None
ERR4809290 Pre-XDR-TB lineage4.3.3 za
ERR4830469 Pre-XDR-TB lineage4.3.3 za
SRR1062843 Pre-XDR-TB lineage4.3.3 None
ERR4828779 Pre-XDR-TB lineage2.2.1 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SAMN01925670 Pre-XDR-TB lineage4.3.3 None
SRR1062842 Pre-XDR-TB lineage4.3.3 None
SRR12708401 MDR-TB lineage4.3.2.1 None
ERR8975698 Pre-XDR-TB lineage4.3.3 None
ERR9992999 XDR-TB lineage4.3.3 None
SAMN01925638 Pre-XDR-TB lineage4.3.3 None
SAMN01925654 Pre-XDR-TB lineage4.3.3 None
SRR1011471 Pre-XDR-TB lineage4.3.3 None
SRR1184366 Pre-XDR-TB lineage4.3.3 None
SRR833086 Pre-XDR-TB lineage4.3.3 za
SRR9970989 Pre-XDR-TB lineage4.3.3 None
ERR8975605 MDR-TB lineage4.3.3 None
ERR8975982 XDR-TB lineage4.3.3 None
SRR2101539 MDR-TB lineage4.3.3 None
SAMEA2534676 MDR-TB lineage2.2.1 kz
SRR1184300 XDR-TB lineage4.3.3 None
SRR11349166 Pre-XDR-TB lineage4.3.3 None
SRR1173199 Pre-XDR-TB lineage4.3.3 None
SRR1180379 Pre-XDR-TB lineage4.3.3 None
SRR26397809 XDR-TB lineage4.3.4.1 None
SRR9971166 XDR-TB lineage4.3.3 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1062826 Pre-XDR-TB lineage4.3.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR833105 Pre-XDR-TB lineage4.3.3 za
SAMN02053760 Pre-XDR-TB lineage4.3.3 za
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173795 Pre-XDR-TB lineage4.3.3 None
SRR1165674 Pre-XDR-TB lineage2;lineage4.3.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SAMN02053748 Pre-XDR-TB lineage4.3.3;lineage4.4.1.1 None
SRR1011472 Pre-XDR-TB lineage4.3.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1173449 Pre-XDR-TB lineage4.3.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR10315627 Pre-XDR-TB lineage4.3.3 None
SRR1196511 Pre-XDR-TB lineage4.3.3 None
ERR9992673 MDR-TB lineage4.3.3 None
SRR7781513 Pre-XDR-TB lineage2.2.1 None
SRR847794 Pre-XDR-TB lineage4.3.3 za
SRR1169191 Pre-XDR-TB lineage4.3.3 None
SRR924694 Pre-XDR-TB lineage4.3.3 None
SRR10868994 Pre-XDR-TB lineage4.3.3 None
ERR13290805 Pre-XDR-TB lineage4.5 None
SRR10315605 Pre-XDR-TB lineage4.3.3 None
ERR13286170 Pre-XDR-TB lineage4.3.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1173789 Pre-XDR-TB lineage3.1.1;lineage4.3.3 None
ERR11488533 Pre-XDR-TB lineage4.3.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR833130 Pre-XDR-TB lineage4.3.3 None
SRR12708414 HR-TB lineage2.2.1 None
SRR9970997 Pre-XDR-TB lineage4.3.3 None
SRR1062827 Pre-XDR-TB lineage4.3.3 None
SAMN02053744 Pre-XDR-TB lineage4.3.3 None
SAMN01925653 Pre-XDR-TB lineage4.3.3 None
SRR10315684 Pre-XDR-TB lineage4.3.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR13289323 Pre-XDR-TB lineage4.3.3 None
SRR924205 Pre-XDR-TB lineage4.3.3 None
ERR2510694 Pre-XDR-TB lineage2.2.1 it
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR13286201 Pre-XDR-TB lineage2.2.2;lineage4.3.3 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR9992972 MDR-TB lineage4.3.3 None
SRR3055713 Pre-XDR-TB lineage4.3.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173410 HR-TB lineage4.3.3 None
ERR4808975 Pre-XDR-TB lineage4.3.3 None
SRR1180330 Pre-XDR-TB lineage4.3.3 None
SRR924208 Pre-XDR-TB lineage4.3.3 None
SRR28393332 MDR-TB lineage4.3.4.1 None
ERR11773705 Pre-XDR-TB lineage4.3.3 None
ERR11773727 Pre-XDR-TB lineage4.3.3 None
SRR833033 Pre-XDR-TB lineage4.3.3 None
ERR4828787 Pre-XDR-TB lineage2.2.1 None
ERR7911566 Pre-XDR-TB lineage4.3.3 za
SRR9971230 Pre-XDR-TB lineage4.3.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4830524 Pre-XDR-TB lineage4.3.3 za
ERR7911627 Pre-XDR-TB lineage2.2.1;lineage4.3.3 za
ERR11773752 Pre-XDR-TB lineage4.3.3 None
ERR4828910 MDR-TB lineage4.8 None
ERR4830515 Pre-XDR-TB lineage4.3.3 za
ERR4830554 Pre-XDR-TB lineage4.3.3 None
ERR4830557 Pre-XDR-TB lineage4.3.3 None
ERR4830506 Pre-XDR-TB lineage4.3.3 za
ERR8975018 XDR-TB lineage4.3.3 None
SRR1180388 Pre-XDR-TB lineage4.3.3 None
SRR6044815 Other lineage4.9 None
SRR924692 Pre-XDR-TB lineage4.3.3 None
SRR1172793 Pre-XDR-TB lineage4.3.3 None
SRR1172918 Other lineage4.3.3 None
SRR1180293 Pre-XDR-TB lineage4.3.3 None
SRR1184301 Pre-XDR-TB lineage4.3.3 None
ERR1193881 Pre-XDR-TB lineage4.3.3 za
ERR2515776 Pre-XDR-TB lineage4.3.3 za
ERR2515344 Pre-XDR-TB lineage4.3.3 za
ERR2515175 Pre-XDR-TB lineage4.3.3 za
SRR1169155 Pre-XDR-TB lineage4.3.3 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR9971375 Pre-XDR-TB lineage4.3.3 None
ERR10610221 MDR-TB lineage4.3.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SAMN02053766 Pre-XDR-TB lineage4.3.3 za
SAMN01828243 Pre-XDR-TB lineage4.3.3 za
SAMN02053773 Pre-XDR-TB lineage4.3.3 za
SAMN02053781 MDR-TB lineage4.3.3 za
SAMN02586104 Pre-XDR-TB lineage4.3.3 za
SAMN02586065 Pre-XDR-TB lineage4.3.3 za
SAMN02586066 Pre-XDR-TB lineage4.3.3 za
SAMN02586069 Pre-XDR-TB lineage4.3.3 za
SAMN02586070 Pre-XDR-TB lineage4.3.3 za
SAMN02586068 Pre-XDR-TB lineage4.3.3 za
SAMN02586087 Pre-XDR-TB lineage4.3.3 za
SAMN02586080 Pre-XDR-TB lineage4.3.3 za
SAMN02586079 Pre-XDR-TB lineage4.3.3 za
SAMN02586081 Pre-XDR-TB lineage4.3.3 za
SAMN02586084 Pre-XDR-TB lineage4.3.3 za
SAMN02586090 Pre-XDR-TB lineage4.3.3 za
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR7361989 Pre-XDR-TB lineage4.3.3 None
ERR3283042 Other lineage4.9 None
SRR10868972 MDR-TB lineage4.3.3 None
ERR1873435 Pre-XDR-TB lineage4.3.3 None
SRR1011474 Pre-XDR-TB lineage4.3.3 None
SRR1169271 Pre-XDR-TB lineage4.3.3 None
SRR9971228 Pre-XDR-TB lineage4.3.3 None
ERR551452 Pre-XDR-TB lineage4.3.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971315 Pre-XDR-TB lineage4.3.3 None
SRR1062835 Pre-XDR-TB lineage4.3.3 None
SRR924219 Pre-XDR-TB lineage4.3.3 None
SRR924207 Pre-XDR-TB lineage4.3.3 None
SRR832996 Pre-XDR-TB lineage4.3.3 None
SRR1167185 Pre-XDR-TB lineage4.3.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1167341 Pre-XDR-TB lineage4.3.3 None
SRR1169248 MDR-TB lineage4.3.3 None
ERR7737731 MDR-TB lineage4.3.3 None
SRR1196510 Pre-XDR-TB lineage4.3.3 None
SRR23340085 MDR-TB lineage4.3.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184382 Pre-XDR-TB lineage4.3.3 None
SRR1011466 Pre-XDR-TB lineage4.3.3 None
SRR10315624 Pre-XDR-TB lineage4.3.3 None
ERR11488704 Pre-XDR-TB lineage4.3.3 None
ERR11488942 Pre-XDR-TB lineage4.3.3 None
SRR10315655 Pre-XDR-TB lineage4.3.3 None
ERR2510693 Pre-XDR-TB lineage2.2.1 it
SRR1180233 Pre-XDR-TB lineage4.3.3 None
ERR552478 MDR-TB lineage2.2.1 None