Rv3806c - p.Val188Ala


Drug resistance types
8 Sensitive 8 RR-TB 58 HR-TB 71 MDR-TB 396 Pre-XDR-TB 23 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.3.3 409
lineage2.2.1 28
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 21
lineage3 1
lineage2.1;lineage4.9 4
lineage4.9 12
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.9.1 1
La1.7;lineage4.9;lineage7 1
lineage3.1.2.1 2
lineage1.1 1
lineage4.4.1.1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.3.4.1 3
lineage4.2.1 2
lineage3.1.1;lineage4.3.3 3
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.2.1;lineage4.3.3 3
La1.7.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2;lineage4.3.3 1
lineage4.3.3;lineage4.4.1.1 2
lineage4.1.1.3 3
lineage2.2.2 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.8 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage1.1.3.1 1
lineage4.4.1.2 1
lineage4.3.2.1;lineage4.3.3 2
M.canetti;lineage2.1 1
lineage4.3.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.5 2
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.2;lineage4.3.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage4.4.1.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.8.1 1
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.3;lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 576
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1011452 Pre-XDR-TB lineage4.3.3 None
SRR1011453 Pre-XDR-TB lineage4.3.3 None
SRR1011457 Pre-XDR-TB lineage4.3.3 None
ERR2510361 Pre-XDR-TB lineage2.2.1 pk
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SAMN01925650 Pre-XDR-TB lineage4.3.3 None
SRR1173780 Pre-XDR-TB lineage4.3.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SAMN02585959 Pre-XDR-TB lineage4.3.3 za
SRR1181391 Pre-XDR-TB lineage4.3.3 None
ERR1193881 Pre-XDR-TB lineage4.3.3 za
SAMN02585982 MDR-TB lineage4.3.3 None
SAMN02586079 Pre-XDR-TB lineage4.3.3 za
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR9992871 XDR-TB lineage4.3.3 None
SRR29289234 MDR-TB lineage3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR4828787 Pre-XDR-TB lineage2.2.1 None
ERR11773708 Pre-XDR-TB lineage4.3.3 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1183043 Pre-XDR-TB lineage4.3.3 None
SRR1062846 Pre-XDR-TB lineage4.3.3 None
SAMN02586017 XDR-TB lineage4.3.3 za
SRR1180369 Pre-XDR-TB lineage4.3.3 None
ERR13288988 MDR-TB lineage4.3.3 None
SRR1181349 Sensitive lineage4 None
SRR1175065 Pre-XDR-TB lineage4.3.3 None
SAMN02586104 Pre-XDR-TB lineage4.3.3 za
ERR11488588 Pre-XDR-TB lineage4.3.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR13289260 Pre-XDR-TB lineage4.3.3 None
ERR971389 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SAMN02350415 Pre-XDR-TB lineage4.3.3 za
SAMN02053773 Pre-XDR-TB lineage4.3.3 za
ERR7361978 Pre-XDR-TB lineage4.3.3 None
SRR833125 Pre-XDR-TB lineage4.3.3 None
ERR13289393 Pre-XDR-TB lineage4.3.3 None
SRR1144815 Pre-XDR-TB lineage4.3.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02350414 Pre-XDR-TB lineage4.3.3 za
SRR1173142 Pre-XDR-TB lineage4.3.3 None
SRR1180301 Pre-XDR-TB lineage4.3.3 None
SRR9970990 Pre-XDR-TB lineage4.3.3 None
SRR11349177 Pre-XDR-TB lineage4.3.3 None
SRR1173391 Pre-XDR-TB lineage4.3.3 None
ERR11043123 MDR-TB lineage2.2.1 None
ERR9806900 Pre-XDR-TB lineage4.3.3 None
SRR11349135 XDR-TB lineage4.3.3 None
ERR2515344 Pre-XDR-TB lineage4.3.3 za
SRR1181243 Pre-XDR-TB lineage4.3.3 None
SRR3743500 Pre-XDR-TB lineage2.2.1 None
SAMN01925615 Pre-XDR-TB lineage4.3.3 None
SAMN02350416 Pre-XDR-TB lineage4.3.3 za
ERR11465189 RR-TB lineage4.9.1 None
ERR11488842 Pre-XDR-TB lineage4.3.3 None
ERR13267430 Pre-XDR-TB lineage4.3.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR4799775 Pre-XDR-TB lineage3.1.2.1 None
SRR9971123 Pre-XDR-TB lineage4.3.3 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR1167293 MDR-TB lineage4.4.1.1.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SAMN01925666 Pre-XDR-TB lineage4.3.3 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SAMN01925639 Pre-XDR-TB lineage4.3.3 None
ERR7361975 Pre-XDR-TB lineage4.3.3 None
SAMN01925668 Pre-XDR-TB lineage4.3.3 None
SRR1173276 XDR-TB lineage4.3.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11773739 Pre-XDR-TB lineage4.3.3 None
SRR3055713 Pre-XDR-TB lineage4.3.3 None
SRR1165723 Pre-XDR-TB lineage4.3.3 None
SRR924208 Pre-XDR-TB lineage4.3.3 None
SRR28393332 MDR-TB lineage4.3.4.1 None
ERR11773705 Pre-XDR-TB lineage4.3.3 None
ERR11773727 Pre-XDR-TB lineage4.3.3 None
SRR28498400 Pre-XDR-TB lineage4.2.1 None
SRR833033 Pre-XDR-TB lineage4.3.3 None
ERR13286170 Pre-XDR-TB lineage4.3.3 None
ERR13288743 Pre-XDR-TB lineage4.3.3 None
SRR1062843 Pre-XDR-TB lineage4.3.3 None
ERR11773752 Pre-XDR-TB lineage4.3.3 None
SRR1180388 Pre-XDR-TB lineage4.3.3 None
SRR6044815 Other lineage4.9 None
SRR1167183 Pre-XDR-TB lineage3.1.1;lineage4.3.3 None
ERR11773709 Pre-XDR-TB lineage4.3.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9992614 Pre-XDR-TB lineage4.3.3 None
ERR9992908 XDR-TB lineage2.2.1;lineage4.3.3 None
SAMN02350429 Pre-XDR-TB lineage4.3.3 za
SRR1062844 Pre-XDR-TB lineage4.3.3 None
SRR7240492 HR-TB La1.7.1 None
SRR924206 Pre-XDR-TB lineage4.3.3 None
SRR1184300 XDR-TB lineage4.3.3 None
ERR2510321 Pre-XDR-TB lineage2.2.1 pk
SRR11349166 Pre-XDR-TB lineage4.3.3 None
ERR9806993 Pre-XDR-TB lineage4.3.3 None
SRR26397809 XDR-TB lineage4.3.4.1 None
SRR9971166 XDR-TB lineage4.3.3 None
SRR9971375 Pre-XDR-TB lineage4.3.3 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971332 Pre-XDR-TB lineage4.3.3 None
ERR7361989 Pre-XDR-TB lineage4.3.3 None
ERR13286202 Pre-XDR-TB lineage4.3.3 None
SRR10868972 MDR-TB lineage4.3.3 None
ERR1873435 Pre-XDR-TB lineage4.3.3 None
SAMN02403569 Pre-XDR-TB lineage4.3.3 za
SRR1173795 Pre-XDR-TB lineage4.3.3 None
SRR1165674 Pre-XDR-TB lineage2;lineage4.3.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2534676 MDR-TB lineage2.2.1 kz
SAMN02053748 Pre-XDR-TB lineage4.3.3;lineage4.4.1.1 None
SAMN02053766 Pre-XDR-TB lineage4.3.3 za
SRR9971315 Pre-XDR-TB lineage4.3.3 None
ERR13285091 Pre-XDR-TB lineage4.1.1.3 None
SRR1062835 Pre-XDR-TB lineage4.3.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR833105 Pre-XDR-TB lineage4.3.3 za
SRR833121 Pre-XDR-TB lineage4.3.3 None
SRR924219 Pre-XDR-TB lineage4.3.3 None
SRR924207 Pre-XDR-TB lineage4.3.3 None
SRR1173789 Pre-XDR-TB lineage3.1.1;lineage4.3.3 None
SAMN02403621 Pre-XDR-TB lineage4.3.3 za
SRR1167185 Pre-XDR-TB lineage4.3.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1169248 MDR-TB lineage4.3.3 None
SRR1196510 Pre-XDR-TB lineage4.3.3 None
SRR833130 Pre-XDR-TB lineage4.3.3 None
SRR12708414 HR-TB lineage2.2.1 None
SRR29096324 Pre-XDR-TB lineage4.3.3 None
SRR29093616 Pre-XDR-TB lineage4.3.3 None
SRR1011466 Pre-XDR-TB lineage4.3.3 None
SRR10315624 Pre-XDR-TB lineage4.3.3 None
SRR1062827 Pre-XDR-TB lineage4.3.3 None
SAMN02053744 Pre-XDR-TB lineage4.3.3 None
SAMN01925653 Pre-XDR-TB lineage4.3.3 None
SRR10315605 Pre-XDR-TB lineage4.3.3 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180233 Pre-XDR-TB lineage4.3.3 None
ERR552478 MDR-TB lineage2.2.1 None
SRR10315604 Pre-XDR-TB lineage4.3.3 None
ERR10748074 Pre-XDR-TB lineage4.3.3 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR7361962 Pre-XDR-TB lineage4.3.3 None
SAMN02350421 Pre-XDR-TB lineage4.3.3 za
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9992629 Pre-XDR-TB lineage4.3.3 None
SRR1173349 Pre-XDR-TB lineage4.3.3 None
ERR7737634 Pre-XDR-TB lineage4.3.3 None
ERR1063846 HR-TB lineage4.9 None
SRR1173024 Sensitive lineage4.3.3 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1169212 Pre-XDR-TB lineage4.3.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184326 Pre-XDR-TB lineage4.3.3 None
SRR847789 Pre-XDR-TB lineage4.3.3 za
SRR15901694 Pre-XDR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR1034984 Pre-XDR-TB lineage4.3.3 za
SAMN01925641 Pre-XDR-TB lineage4.3.3 None
SRR9971187 Pre-XDR-TB lineage4.3.3 None
SAMN02586074 Pre-XDR-TB lineage4.3.3 None
ERR4828910 MDR-TB lineage4.8 None
SRR1165660 Pre-XDR-TB lineage4.3.3 None
ERR4828774 Pre-XDR-TB lineage2.2.1 None
SRR1011458 Pre-XDR-TB lineage4.3.3 None
SRR1062839 Pre-XDR-TB lineage4.3.3 None
SRR1181357 Pre-XDR-TB lineage4.3.3 None
SRR1196530 Pre-XDR-TB lineage4.3.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1011456 Pre-XDR-TB lineage4.3.3 None
SRR1196504 Pre-XDR-TB lineage4.3.3 None
SRR847792 Pre-XDR-TB lineage4.3.3 za
SRR847785 Pre-XDR-TB lineage4.3.3 za
ERR8479578 Sensitive lineage1.1.3.1 None
SAMN02053807 Pre-XDR-TB lineage4.3.3 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1184331 Pre-XDR-TB lineage4.3.3 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9993040 Pre-XDR-TB lineage4.3.3 None
SRR833077 Pre-XDR-TB lineage4.3.3 za
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR847777 Pre-XDR-TB lineage4.3.3 za
SRR924693 Pre-XDR-TB lineage4.3.3;lineage4.4.1.1 None
SRR14782129 MDR-TB lineage4.2.1 None
ERR10610199 Pre-XDR-TB lineage4.3.3 None
SRR1184333 Pre-XDR-TB lineage4.3.3 None
SRR6855822 Pre-XDR-TB lineage4.3.2.1;lineage4.3.3 None
SAMN02586065 Pre-XDR-TB lineage4.3.3 za
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831575 Pre-XDR-TB lineage4.3.3 None
SRR832991 Pre-XDR-TB lineage4.3.3 None
ERR7361995 Pre-XDR-TB lineage4.3.3 None
SRR833013 Pre-XDR-TB lineage4.3.3 None
SRR833058 Pre-XDR-TB lineage4.3.3 za
SRR1196575 Pre-XDR-TB lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9806902 Pre-XDR-TB lineage4.3.3 None
SRR924227 Pre-XDR-TB lineage4.3.3 None
SRR1011470 Pre-XDR-TB lineage4.3.3 None
ERR4831538 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
SRR1196503 Pre-XDR-TB lineage4.3.3 None
ERR2515776 Pre-XDR-TB lineage4.3.3 za
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR473327 Pre-XDR-TB lineage4.3.3 None
SRR1173354 Pre-XDR-TB lineage4.3.3 None
ERR9119096 RR-TB lineage4.3.3 None
SRR924234 Pre-XDR-TB lineage4.3.3 None
SRR8758885 Pre-XDR-TB lineage4.3.3 None
ERR552479 MDR-TB lineage2.2.1 None
SRR1173200 Pre-XDR-TB lineage4.3.3 None
ERR5918119 Pre-XDR-TB lineage4.3.3 za
ERR7737921 MDR-TB lineage4.3.3 None
SAMN02586041 Pre-XDR-TB lineage4.3.3 za
SAMN02586084 Pre-XDR-TB lineage4.3.3 za
SRR1019172 Pre-XDR-TB lineage4.3.3 None
SRR1175325 Pre-XDR-TB lineage4.3.3 None
SRR833078 Pre-XDR-TB lineage4.3.3 za
SRR847779 Pre-XDR-TB lineage4.3.3 za
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR9992957 XDR-TB lineage4.3.3 None
ERR11773740 Pre-XDR-TB lineage4.3.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN01925670 Pre-XDR-TB lineage4.3.3 None
SAMN02350425 Pre-XDR-TB lineage4.3.3 za
SAMN02350430 Pre-XDR-TB lineage4.3.3 za
SAMN02350431 Pre-XDR-TB lineage4.3.3 za
SAMN02586018 Pre-XDR-TB lineage4.3.3 za
SRR1062842 Pre-XDR-TB lineage4.3.3 None
SRR12708401 MDR-TB lineage4.3.2.1 None
SRR924692 Pre-XDR-TB lineage4.3.3 None
ERR2515175 Pre-XDR-TB lineage4.3.3 za
ERR7911627 Pre-XDR-TB lineage2.2.1;lineage4.3.3 za
SAMN02586081 Pre-XDR-TB lineage4.3.3 za
SRR1011471 Pre-XDR-TB lineage4.3.3 None
SRR11349167 Pre-XDR-TB lineage4.3.3 None
ERR13288794 Pre-XDR-TB lineage4.3.3 None
SRR1172793 Pre-XDR-TB lineage4.3.3 None
SRR1172918 Other lineage4.3.3 None
SRR1180293 Pre-XDR-TB lineage4.3.3 None
ERR9992791 XDR-TB lineage4.3.3 None
ERR9993074 Pre-XDR-TB lineage4.3.3 None
SRR1173199 Pre-XDR-TB lineage4.3.3 None
SRR1180379 Pre-XDR-TB lineage4.3.3 None
SRR924225 Pre-XDR-TB lineage4.3.3 None
SRR924232 Pre-XDR-TB lineage4.3.3 None
SRR9970994 Pre-XDR-TB lineage4.3.3 None
SRR847776 Pre-XDR-TB lineage4.3.3 za
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3275196 Other lineage2.2.1 nl
ERR8975982 XDR-TB lineage4.3.3 None
ERR3283042 Other lineage4.9 None
SAMN02586073 Pre-XDR-TB lineage4.3.3 za
SRR1011474 Pre-XDR-TB lineage4.3.3 None
SRR1172254 Pre-XDR-TB lineage4.3.3 None
SRR1169271 Pre-XDR-TB lineage4.3.3 None
SRR1181290 Pre-XDR-TB lineage4.3.3 None
SRR9971228 Pre-XDR-TB lineage4.3.3 None
ERR551452 Pre-XDR-TB lineage4.3.3 None
ERR7911566 Pre-XDR-TB lineage4.3.3 za
SRR21576680 Pre-XDR-TB lineage4.5 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR832996 Pre-XDR-TB lineage4.3.3 None
SRR1173449 Pre-XDR-TB lineage4.3.3 None
SRR10315627 Pre-XDR-TB lineage4.3.3 None
SRR1167341 Pre-XDR-TB lineage4.3.3 None
ERR7737731 MDR-TB lineage4.3.3 None
SRR1196511 Pre-XDR-TB lineage4.3.3 None
ERR9992673 MDR-TB lineage4.3.3 None
SRR9970997 Pre-XDR-TB lineage4.3.3 None
SRR23340085 MDR-TB lineage4.3.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SAMN01828243 Pre-XDR-TB lineage4.3.3 za
SRR7781513 Pre-XDR-TB lineage2.2.1 None
SRR9970995 XDR-TB lineage4.3.3 None
SRR1184382 Pre-XDR-TB lineage4.3.3 None
SAMN02053760 Pre-XDR-TB lineage4.3.3 za
SRR924694 Pre-XDR-TB lineage4.3.3 None
SRR10315684 Pre-XDR-TB lineage4.3.3 None
SRR10868994 Pre-XDR-TB lineage4.3.3 None
ERR11488704 Pre-XDR-TB lineage4.3.3 None
ERR11488942 Pre-XDR-TB lineage4.3.3 None
ERR4830515 Pre-XDR-TB lineage4.3.3 za
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR1165225 Pre-XDR-TB lineage4.3.3 None
ERR2515754 Pre-XDR-TB lineage4.3.3 za
ERR4830557 Pre-XDR-TB lineage4.3.3 None
SAMN02403568 Pre-XDR-TB lineage4.3.3 za
ERR7362014 Pre-XDR-TB lineage4.3.3 None
SRR924223 Pre-XDR-TB lineage4.3.3 None
SRR833059 Pre-XDR-TB lineage4.3.3 za
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR1173518 Pre-XDR-TB lineage3.1.1;lineage4.3.3 None
SRR1175081 MDR-TB lineage4.3.3 None
ERR4808975 Pre-XDR-TB lineage4.3.3 None
SRR1173180 Pre-XDR-TB lineage4.3.3 None
ERR9806901 Pre-XDR-TB lineage4.3.3 None
SAMN02586090 Pre-XDR-TB lineage4.3.3 za
SRR12708392 Other lineage2.2.1 None
SAMN02350422 Pre-XDR-TB lineage4.3.3 za
SRR9971040 Pre-XDR-TB lineage4.3.3 None
ERR5918042 XDR-TB lineage4.3.3 za
ERR3132265 MDR-TB lineage4.3.3 None
SRR10315583 Pre-XDR-TB lineage4.3.3 None
SRR9971039 XDR-TB lineage4.3.3 None
SRR1173560 Pre-XDR-TB lineage4.3.3 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR924212 Pre-XDR-TB lineage4.3.3 None
SRR924697 Pre-XDR-TB lineage4.3.3 None
SRR924214 Pre-XDR-TB lineage4.3.3 None
SRR3055714 Pre-XDR-TB lineage4.3.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11043156 MDR-TB lineage4.8 None
SRR1181396 Pre-XDR-TB lineage4.3.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29055678 Pre-XDR-TB lineage4.3.3 None
ERR9992915 XDR-TB lineage4.3.3 None
SRR1062825 Pre-XDR-TB lineage4.3.3 None
ERR8025486 Pre-XDR-TB lineage4.3.3 None
SRR10315653 Pre-XDR-TB lineage4.3.3 None
SRR10315686 Pre-XDR-TB lineage4.3.3 None
SRR924230 Pre-XDR-TB lineage4.3.3 None
SRR1196576 Pre-XDR-TB lineage4.3.3 None
SRR1175512 Sensitive lineage4.9 None
ERR10748187 Pre-XDR-TB lineage4.3.3 None
ERR9806959 Pre-XDR-TB lineage4.3.3 None
ERR5311094 HR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02350427 Pre-XDR-TB lineage4.3.3 za
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1011468 Pre-XDR-TB lineage4.3.3 None
SAMN01925660 Pre-XDR-TB lineage4.3.3 None
ERR7361964 Pre-XDR-TB lineage4.3.3 None
ERR2510694 Pre-XDR-TB lineage2.2.1 it
ERR8975698 Pre-XDR-TB lineage4.3.3 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR7361984 Pre-XDR-TB lineage4.3.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR9971303 Pre-XDR-TB lineage4.3.3 None
SRR1181174 Pre-XDR-TB lineage4.3.3 None
ERR9992615 XDR-TB lineage4.3.3 None
SAMN02585981 Pre-XDR-TB lineage4.3.3 za
ERR13286214 Pre-XDR-TB lineage4.3.3 None
SRR924226 Pre-XDR-TB lineage4.3.3 None
ERR13286201 Pre-XDR-TB lineage2.2.2;lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR8025683 Pre-XDR-TB lineage4.3.3 None
SRR833137 MDR-TB lineage4.3.3 None
ERR11488367 Pre-XDR-TB lineage4.3.3 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29056339 MDR-TB lineage4.3.3 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02350413 Pre-XDR-TB lineage4.3.3 za
SAMN02586069 Pre-XDR-TB lineage4.3.3 za
SRR1181138 Pre-XDR-TB lineage4.3.3 None
ERR11488368 Pre-XDR-TB lineage4.3.3 None
SRR1184297 Pre-XDR-TB lineage4.3.3 None
ERR11488703 Pre-XDR-TB lineage4.3.3 None
SRR847801 Pre-XDR-TB lineage4.3.3 None
SRR833029 Pre-XDR-TB lineage4.3.3 None
SRR924216 Pre-XDR-TB lineage4.3.3 None
ERR7361959 Pre-XDR-TB lineage4.3.3 None
ERR8025485 Pre-XDR-TB lineage4.3.3 None
ERR9992972 MDR-TB lineage4.3.3 None
ERR11773725 Pre-XDR-TB lineage4.3.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173410 HR-TB lineage4.3.3 None
SRR1180330 Pre-XDR-TB lineage4.3.3 None
ERR13288915 MDR-TB lineage4.3.3 None
ERR13289280 Pre-XDR-TB lineage4.3.3 None
SRR9971230 Pre-XDR-TB lineage4.3.3 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9992999 XDR-TB lineage4.3.3 None
SAMN01925638 Pre-XDR-TB lineage4.3.3 None
SAMN01925654 Pre-XDR-TB lineage4.3.3 None
SRR1184366 Pre-XDR-TB lineage4.3.3 None
SRR833086 Pre-XDR-TB lineage4.3.3 za
SRR9970989 Pre-XDR-TB lineage4.3.3 None
ERR4828779 Pre-XDR-TB lineage2.2.1 None
SRR1184301 Pre-XDR-TB lineage4.3.3 None
SRR1169155 Pre-XDR-TB lineage4.3.3 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR10610221 MDR-TB lineage4.3.3 None
SAMN01925661 Pre-XDR-TB lineage4.3.3 None
SAMN01925634 Pre-XDR-TB lineage4.3.3 za
SRR1062826 Pre-XDR-TB lineage4.3.3 None
ERR4808877 Pre-XDR-TB lineage4.3.3 za
SRR26397810 Pre-XDR-TB lineage4.3.4.1 None
ERR4809290 Pre-XDR-TB lineage4.3.3 za
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1172869 Pre-XDR-TB lineage4.3.3 None
ERR8975004 Pre-XDR-TB lineage4.3.3 None
SRR1175506 Sensitive lineage4.9 None
SRR1011472 Pre-XDR-TB lineage4.3.3 None
SAMN01925658 Pre-XDR-TB lineage4.3.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4830554 Pre-XDR-TB lineage4.3.3 None
ERR2515682 Pre-XDR-TB lineage4.3.3 za
ERR11488533 Pre-XDR-TB lineage4.3.3 None
ERR040123 MDR-TB lineage3.1.2.1 ug
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR2515622 Pre-XDR-TB lineage4.3.2.1;lineage4.3.3 za
ERR4810624 MDR-TB lineage2.2 None
SRR847794 Pre-XDR-TB lineage4.3.3 za
ERR8975605 MDR-TB lineage4.3.3 None
SRR1169191 Pre-XDR-TB lineage4.3.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR13290805 Pre-XDR-TB lineage4.5 None
SRR924205 Pre-XDR-TB lineage4.3.3 None
SRR10315655 Pre-XDR-TB lineage4.3.3 None
SAMN02403467 Pre-XDR-TB lineage4.3.3 za
ERR8975819 Pre-XDR-TB lineage4.3.3 None
ERR7361988 Pre-XDR-TB lineage4.3.3 None
SRR14781842 HR-TB lineage2.2.1 None
SAMN02586066 Pre-XDR-TB lineage4.3.3 za
ERR4831509 Pre-XDR-TB lineage2.2.1 pk
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR2101539 MDR-TB lineage4.3.3 None
ERR11488574 Pre-XDR-TB lineage4.3.3 None
SRR1011463 Pre-XDR-TB lineage4.3.3 None
ERR4830506 Pre-XDR-TB lineage4.3.3 za
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181376 Pre-XDR-TB lineage4.3.3 None
SRR1062822 Pre-XDR-TB lineage4.3.3 None
SRR1167350 Pre-XDR-TB lineage4.3.3 None
SRR847791 Pre-XDR-TB lineage4.3.3 za
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR833173 Pre-XDR-TB lineage4.3.3 za
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1062823 Pre-XDR-TB lineage4.3.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR833023 Pre-XDR-TB lineage4.3.3 None
SAMN01925617 Pre-XDR-TB lineage4.3.3 None
SRR833064 Pre-XDR-TB lineage4.3.3 None
ERR4829041 Pre-XDR-TB lineage2.2.1 it
ERR4829823 Pre-XDR-TB lineage2.2.1 it
SRR5153930 Pre-XDR-TB lineage2.2.1 None
SAMN01925667 Pre-XDR-TB lineage4.3.3 None
SAMN02350433 Pre-XDR-TB lineage4.3.3 za
ERR2510849 Pre-XDR-TB lineage2.2.1 it
SRR1173154 MDR-TB lineage4.3.3;lineage4.4.1.1.1 None
SRR1173039 Pre-XDR-TB lineage4.3.3 None
ERR552049 MDR-TB lineage4.3.3 None
SRR1184320 Pre-XDR-TB lineage4.3.3 None
ERR9993123 XDR-TB lineage4.3.3 None
SAMN02350411 Pre-XDR-TB lineage4.3.3 za
ERR11773750 Pre-XDR-TB lineage4.3.3 None
SRR847778 Pre-XDR-TB lineage4.3.3 za
SRR1062824 Pre-XDR-TB lineage4.3.3 None
SAMN01925619 Pre-XDR-TB lineage4.3.3 za
ERR13286043 Pre-XDR-TB lineage4.3.3 None
SRR1175487 Sensitive lineage4.9 None
SRR924220 Pre-XDR-TB lineage4.3.3 None
ERR3797015 HR-TB lineage4.9 None
ERR9806996 Pre-XDR-TB lineage4.3.3 None
SRR1180433 Pre-XDR-TB lineage4.3.3 None
SRR1011455 Pre-XDR-TB lineage4.3.3 None
ERR11488702 Pre-XDR-TB lineage4.3.3 None
SRR847787 Pre-XDR-TB lineage4.3.3 za
SRR3085252 Pre-XDR-TB lineage2.2.1 None
ERR11488483 Pre-XDR-TB lineage4.3.3 None
SRR23339947 MDR-TB lineage4.3.3 None
ERR9992695 XDR-TB lineage4.3.3 None
SRR1175022 Pre-XDR-TB lineage4.3.3 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR847793 Pre-XDR-TB lineage4.3.3 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SAMN01925663 Pre-XDR-TB lineage4.3.3 za
SRR1019171 Pre-XDR-TB lineage4.3.3 None
SRR10315625 Pre-XDR-TB lineage4.3.3 None
SAMN02586070 Pre-XDR-TB lineage4.3.3 za
ERR10748177 Pre-XDR-TB lineage4.3.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196515 Pre-XDR-TB lineage4.3.3 None
SRR1184378 Pre-XDR-TB lineage4.3.3 None
SAMN01925618 Pre-XDR-TB lineage4.3.3 None
SAMN02350426 Pre-XDR-TB lineage4.3.3 za
ERR2515319 Pre-XDR-TB lineage4.3.3 za
SRR12708418 HR-TB lineage2.2.1 None
SAMN02586068 Pre-XDR-TB lineage4.3.3 za
ERR8975080 Pre-XDR-TB lineage4.3.3 None
SAMN02586080 Pre-XDR-TB lineage4.3.3 za
ERR4808988 Pre-XDR-TB lineage4.3.3 za
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR9993119 Pre-XDR-TB lineage4.3.3 None
ERR4831550 Pre-XDR-TB lineage4.3.3 None
ERR9806821 Pre-XDR-TB lineage4.3.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173370 MDR-TB lineage4.3.3 None
SAMN01925640 Pre-XDR-TB lineage4.3.3 None
SRR10315751 MDR-TB lineage4.8 None
ERR11465081 Pre-XDR-TB lineage4.3.3 None
SRR1181170 Pre-XDR-TB lineage4.3.3 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR11080930 Pre-XDR-TB lineage4.1.1.3 None
SRR1173448 Pre-XDR-TB lineage4.3.3 None
ERR9992647 XDR-TB lineage4.3.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR924213 Pre-XDR-TB lineage4.3.3 None
SRR1181220 Pre-XDR-TB lineage4.3.3 None
SRR1196477 Pre-XDR-TB lineage4.3.3 None
ERR8975515 Pre-XDR-TB lineage4.3.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SAMN02586076 Pre-XDR-TB lineage4.3.3 za
SRR1165698 Pre-XDR-TB lineage4.3.3 None
SAMN01925651 Pre-XDR-TB lineage4.3.3 None
ERR8025610 Pre-XDR-TB lineage4.3.3 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR833115 Pre-XDR-TB lineage4.3.3 za
SRR847788 Pre-XDR-TB lineage4.3.3 za
SRR847796 Pre-XDR-TB lineage4.3.3 za
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR13284043 MDR-TB lineage2.2.1 None
SAMN01925614 Pre-XDR-TB lineage4.3.3 None
ERR8975821 XDR-TB lineage4.3.3 None
ERR4830524 Pre-XDR-TB lineage4.3.3 za
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN01925636 Pre-XDR-TB lineage4.3.3 None
SRR924215 Pre-XDR-TB lineage4.3.3 None
SRR1062828 Pre-XDR-TB lineage4.3.3 None
SRR847783 Pre-XDR-TB lineage4.3.3 za
SRR9970987 Pre-XDR-TB lineage4.3.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1165629 Pre-XDR-TB lineage4.3.3 None
SRR25389476 HR-TB lineage2.2.1 None
SAMN02053781 MDR-TB lineage4.3.3 za
SRR1173101 Pre-XDR-TB lineage4.3.3 None
SRR15901693 Pre-XDR-TB lineage2.2.1 None
ERR4830469 Pre-XDR-TB lineage4.3.3 za
SRR1011462 Pre-XDR-TB lineage4.3.3 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6981952 MDR-TB lineage4.3.3 None
ERR7737750 MDR-TB lineage4.3.3 None
SRR847800 Pre-XDR-TB lineage4.3.3 za
SRR9971243 Pre-XDR-TB lineage4.3.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SAMN02350412 Pre-XDR-TB lineage4.3.3 za
SRR1062834 Pre-XDR-TB lineage4.3.3 None
SRR1172323 Pre-XDR-TB lineage4.3.3 None
ERR8975018 XDR-TB lineage4.3.3 None
SRR1196542 XDR-TB lineage4.3.3 None
ERR2510693 Pre-XDR-TB lineage2.2.1 it
SAMN02586087 Pre-XDR-TB lineage4.3.3 za
SRR924231 Pre-XDR-TB lineage4.3.3 None
SRR9971051 Pre-XDR-TB lineage4.3.3 None
SRR1062840 Pre-XDR-TB lineage4.3.3 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR7911687 Pre-XDR-TB lineage4.3.3 za
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29055619 MDR-TB lineage4.3.3 None
ERR7361977 Pre-XDR-TB lineage4.3.3 None
SRR1011454 Pre-XDR-TB lineage4.3.3 None
SAMN01925659 Pre-XDR-TB lineage4.3.3 None