EBG00000313325 - n.828_842delTTTCCTTCCTTGGGAinsGGACATTCCACGTTT
Drug resistance types
0 Sensitive
3 RR-TB
0 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| lineage4.1.3 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9 | 16 |
| lineage4.8 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 37 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR10796598 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4.8 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5818411 | RR-TB | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5818414 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR5818458 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796577 | Other | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4.7 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR5818445 | Other | lineage4.9 | None |
|---|
