EBG00000313339 - n.775C>T
Drug resistance types
10 Sensitive
0 RR-TB
17 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| La3;lineage4.9 | 3 |
| lineage4.9 | 19 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 1 | |
| lineage2.2.1 | 7 |
| lineage5.2 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.2 | 1 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.8 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8552934 | Other | lineage3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR15316443 | Pre-XDR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR11972239 | Sensitive | lineage2.2.2 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR23316591 | HR-TB | lineage1.2.1.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None |
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