Rv0005 - c.1489_1491delCTAinsTG


Drug resistance types
52 Sensitive 7 RR-TB 49 HR-TB 14 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 168 Other
lineage Counts
lineage Count
lineage4.9 109
lineage4.8 2
lineage4.1.2.1 12
La3;lineage4.9 6
lineage2.1;lineage4.9 14
lineage2.2.1 22
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4 8
lineage4.2.2.2 1
lineage4.6.2.2 3
lineage3.1 1
lineage4.5 1
lineage4.3.2.1 1
La1.7;lineage4.9 1
lineage4.3.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1;lineage4.9 2
lineage4.1.3 2
La1;lineage4.1.2 1
lineage4.8.1 1
lineage2.1 5
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage1.1.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
20
lineage4.9;lineage6.3 5
La1.6;lineage4 1
lineage3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 9
La3;lineage2.1;lineage4.9 3
La3;lineage1.1.2 1
lineage4.1.2 1
lineage4.2.1 2
La1;lineage2;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.3.3 3
lineage3;lineage4.9 1
lineage4.1.1.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
La3;lineage4.8 1
lineage4.3.4.2.1 1
lineage2.2.2 1
lineage4.7 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.2.1;lineage3 1
lineage4.1;lineage4.8 2
lineage1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.1.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 1
lineage2.2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 294
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR363474 Sensitive lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR3675214 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR349264 Other lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR363498 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR1184294 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3675387 Other lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6785527 Sensitive lineage2.2.1 None
ERR4178226 Sensitive lineage4 None
SRR3675547 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR9970978 Other La1;lineage4.1.2 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2517475 Other lineage4 None
SRR3675311 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363479 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR1063896 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR28351554 Other La1.6;lineage4 None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR369162 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1175496 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675473 Sensitive lineage4.9 None
ERR3283044 Other lineage4 None
ERR2512770 Sensitive lineage4.2.1 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR349265 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR6865502 Sensitive lineage4 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
SRR6789621 Other lineage4.9 None
SRR1175508 Sensitive lineage4.9 None
SRR6785227 Other lineage2.2.1 None
SRR1173384 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR373947 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12708419 Other lineage4.3.3 None
SRR5341396 Other lineage3;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR349266 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786671 Other None
ERR9786843 Other None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR9787197 Other None
SRR3675236 Other None
SRR12708416 Sensitive None
ERR349300 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR6785262 Sensitive lineage4.2.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR363421 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR702406 Other lineage2.1 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063883 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR21732980 Other lineage4.3.3 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR5341453 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR12416842 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4797201 Other lineage1.2.2.2 None
ERR369156 Sensitive lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4797588 MDR-TB lineage3 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR2446382 Other lineage4 None
SRR3675260 Sensitive lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045503 Other lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR736856 HR-TB lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786604 Other None
SRR1184372 MDR-TB None
SRR7535086 Other None
ERR212001 HR-TB None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363449 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR373945 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR6785413 Other lineage2.2.1 None
ERR369157 Sensitive lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR3275450 Other lineage4 None
ERR369158 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675292 Sensitive lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None