lineage | Count |
---|---|
70 | |
lineage2.2 | 5 |
lineage4.1 | 1 |
lineage4 | 15 |
lineage4.9 | 7 |
lineage2.2.1 | 3 |
lineage3 | 1 |
lineage3.1 | 1 |
lineage4.6.2.2 | 2 |
lineage4.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
La1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 110 |
ID | Drug resistance | Lineage | Country iso2 | SRR8692905 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR161033 | HR-TB | None | SRR8692887 | Other | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675279 | Other | None | SRR3675486 | HR-TB | None | ERR176751 | HR-TB | None | SRR5341456 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675522 | Other | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR4819051 | Other | lineage4 | None | SRR6152674 | HR-TB | lineage2.2.1 | ca | SRR5341408 | Sensitive | lineage3 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | ERR2693230 | Other | None | SRR6045519 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046299 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046824 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502889 | Other | None | ERR323063 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323041 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR3283025 | HR-TB | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283040 | HR-TB | None | ERR3439432 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797015 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797083 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR6358837 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4811030 | Sensitive | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR6358991 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR736835 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR8976043 | HR-TB | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR9786843 | Other | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1640750 | HR-TB | None |
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