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SRA data
Rv1644
- c.-9G>C
Drug resistance types
591 Sensitive
23 RR-TB
61 HR-TB
33 MDR-TB
45 Pre-XDR-TB
1 XDR-TB
85 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.5
825
lineage2.2.1;lineage4.5
4
lineage3;lineage4.5
3
lineage4.5;lineage4.8
1
lineage3.1.2;lineage4.5
1
lineage4.5;lineage4.9
1
lineage1.2.1.2.1;lineage4.5
1
lineage4.3.3;lineage4.5
1
lineage1.1.2;lineage4
1
La1.2;lineage4.5
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
839
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR130106
Pre-XDR-TB
lineage4.5
None
ERR023261
Sensitive
lineage4.5
None
ERR1023312
Sensitive
lineage4.5
None
ERR1023362
Sensitive
lineage4.5
None
ERR1034656
MDR-TB
lineage4.5
bg
ERR1035153
Sensitive
lineage4.5
sa
ERR10465759
Sensitive
lineage4.5
None
ERR10465770
Sensitive
lineage4.5
None
ERR10465783
HR-TB
lineage4.5
None
ERR10465844
Sensitive
lineage4.5
None
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