EBG00000313325 - n.1028C>A
Drug resistance types
26 Sensitive
2 RR-TB
2 HR-TB
11 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| 1 | |
| lineage2.2.1 | 20 |
| La1.7.1 | 5 |
| La2 | 1 |
| La1.8.1 | 2 |
| lineage3 | 4 |
| lineage4.9.1 | 1 |
| lineage4.3.2.1 | 5 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1.1 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 5 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.8 | 4 |
| lineage4.3.2 | 3 |
| lineage4.3.3 | 2 |
| lineage1.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.4 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.1.2 | 5 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2 | 3 |
| lineage2.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage2.2.1;lineage1.1.2 | 1 |
| lineage1.1.2 | 1 |
| La1.2 | 1 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11972311 | Pre-XDR-TB | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199746 | Other | La1.7.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR18391683 | Other | La1.7.1 | None | SRR13888750 | Other | La2 | None | SRR1791909 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR18911138 | Other | lineage3 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101678 | Sensitive | lineage4.4.1.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101730 | Sensitive | lineage4.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR21658385 | Sensitive | lineage4.3.2 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21686601 | Other | lineage1.2.1.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR21728339 | Other | lineage3 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR3675491 | Other | lineage4.7 | None | ERR1577252 | HR-TB | lineage2.2.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | SRR3675452 | Other | lineage3 | None | SRR4035795 | HR-TB | lineage4.1.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR2515364 | Sensitive | lineage4.1.2 | za | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | ERR2515484 | Other | lineage4.8 | None | ERR2515662 | Other | lineage2.2.1 | za | ERR2515916 | Sensitive | lineage4.3.4.2.1 | za | ERR2515191 | Other | lineage2.2.1 | za | ERR4828973 | MDR-TB | lineage4.4.1.1 | None | ERR2851371 | Other | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6982140 | Other | lineage2.2 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982100 | Sensitive | lineage4.4.1.1.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6896539 | MDR-TB | lineage3 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6855917 | Other | lineage4.8 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR4407547 | Sensitive | lineage4.3.2 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR4797622 | Pre-XDR-TB | lineage2.2.1;lineage1.1.2 | in | ERR9786844 | Other | lineage4.3.4.2 | None | ERR4797624 | Sensitive | lineage1.1.2 | in | ERR6337385 | Other | La1.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | SRR10993956 | Other | La1.6 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR11294512 | Other | La1.8.1 | None | SRR11342683 | Other | lineage4.1.2 | None |
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