lineage | Count |
---|---|
La2 | 1 |
lineage1.1.2 | 2 |
lineage3 | 3 |
lineage4.3.2.1 | 4 |
lineage1.1.3.2 | 2 |
lineage2.2.1.1 | 2 |
lineage2.2.1 | 15 |
lineage4.8 | 5 |
lineage4.6.2.2 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.3.4.2 | 2 |
lineage4.1.2 | 2 |
La1.7.1 | 4 |
La1.8.1 | 9 |
lineage4.4.1.1.1 | 2 |
lineage4.9 | 5 |
lineage2.2.2 | 2 |
lineage1.2.2.1 | 1 |
lineage4.3.4.1 | 2 |
lineage1.2.1.2.1 | 1 |
lineage4.1.1.3 | 2 |
lineage1.1.3 | 1 |
lineage4.4.1.1 | 1 |
lineage1.1.2;lineage2.2.1 | 1 |
lineage4.3.3 | 2 |
lineage2.2.1;lineage4 | 1 |
lineage4.7 | 1 |
lineage4.9.1 | 1 |
La1.2 | 1 |
lineage4.6.4 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | SRR13888750 | Other | La2 | None | ERR4797624 | Sensitive | lineage1.1.2 | in | SRR3675452 | Other | lineage3 | None | SRR6982383 | Other | lineage4.3.2.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR6982140 | Other | lineage2.2.1.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982419 | Other | lineage4.8 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | ERR9786844 | Other | lineage4.3.4.2 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR2515364 | Sensitive | lineage4.1.2 | za | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR1792247 | Other | La1.7.1 | None | SRR7236178 | Other | La1.8.1 | None | SRR6982292 | Other | lineage4.4.1.1.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR1792140 | Other | La1.8.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7240068 | Other | La1.8.1 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | ERR2515662 | Other | lineage2.2.1 | za | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR1791909 | Other | La1.7.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | ERR2515191 | Other | lineage2.2.1 | za | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101659 | Other | lineage4.4.1.1.1 | None | ERR867573 | Other | lineage4.9 | None | SRR7236240 | Other | La1.8.1 | None | SRR7240070 | Other | La1.8.1 | None | ERR2515484 | Sensitive | lineage4.8 | None | ERR4797622 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | in | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21728339 | Other | lineage3 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR867569 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR18911138 | Other | lineage3 | None | SRR13199746 | Other | La1.7.1 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR7240448 | Other | La1.8.1 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | ERR6337385 | Other | La1.2 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR7240147 | Other | La1.8.1 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR18391683 | Other | La1.7.1 | None | ERR1679641 | Other | lineage4.6.4 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR7240449 | Other | La1.8.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR7236374 | Other | La1.8.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21732773 | Sensitive | lineage1.1.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None |
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