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SRA data
EBG00000313325
- n.1354delC
Drug resistance types
60 Sensitive
6 RR-TB
3 HR-TB
10 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
38
lineage2.2.1
11
lineage4.6.1.1
6
lineage2.2.2
6
lineage4.9.1
3
lineage4.1.1.3
3
lineage3
3
lineage4.1.2
3
lineage4.3.4.2.1
3
lineage4.2.1
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
104
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034791
RR-TB
lineage4.9
None
ERR1140774
Sensitive
lineage5.1.1
None
ERR1140781
Sensitive
lineage3.1
None
ERR1140783
Sensitive
lineage2.2.2
None
ERR1140785
Sensitive
lineage1.1.2
None
ERR1140791
Sensitive
lineage1.2.1.2
None
ERR126611
Sensitive
lineage4.9.1
None
ERR164004
Sensitive
lineage4.9
None
ERR1873445
MDR-TB
lineage2.2.1
None
ERR1873557
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 104 entries
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