EBG00000313325 - n.993A>T


Drug resistance types
28 Sensitive 1 RR-TB 4 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 27 Other
lineage Counts
lineage Count
lineage2.2.1 8
4
lineage1 1
lineage4;lineage2.2.1 1
lineage3 2
lineage2.2.2 2
lineage4.4.1.1 4
lineage4.3.4.2.1 1
lineage4.3.2.1 3
lineage4.7 1
lineage4.8 6
lineage4.1.2 2
lineage4.1.1 1
lineage4.9 6
lineage4.3.3 5
lineage4.3.4.1 1
lineage1.1.3.2 1
lineage4.6.2.2 1
lineage4.1.2.1 3
La1.2 1
La1.6 1
La1.7.1 2
La1.8.1 1
lineage4.9.1 1
lineage2.2.1.1 2
lineage1.2.1.2.1 2
lineage4.1.1.3 1
lineage4.6.4 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6982194 Other lineage2.2.1 None
SRR6982196 Sensitive None
SRR6982198 HR-TB lineage1 None
SRR6982448 Sensitive lineage4;lineage2.2.1 None
SRR6896539 MDR-TB lineage3 None
SRR6982494 Other lineage2.2.2 None
SRR6982334 Sensitive lineage4.4.1.1 None
SRR6982313 Sensitive lineage4.3.4.2.1 None
SRR6982362 Other lineage4.3.2.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6855718 Sensitive lineage4.8 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6982371 Sensitive lineage4.1.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6981966 Other lineage2.2.1 None
SRR6981981 Other lineage4.3.3 None
SRR6982383 Other lineage4.3.2.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982050 Sensitive lineage4.3.4.1 None
SRR6982405 Sensitive None
SRR6856032 Sensitive lineage2.2.1 None
ERR3283008 Other lineage4.9 None
ERR3324328 MDR-TB lineage2.2.1 None
ERR3324375 Other lineage1.1.3.2 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR3324347 Sensitive lineage4.1.2.1 None
ERR3324362 HR-TB lineage4.1.2.1 None
ERR6337385 Other La1.2 None
ERR2515460 Sensitive lineage4.8 za
SRR10993956 Other La1.6 None
SRR10869086 Pre-XDR-TB lineage2.2.2 None
SRR13199746 Other La1.7.1 None
SRR1791899 HR-TB La1.8.1 None
SRR2101628 Other lineage4.3.2.1 None
SRR1791909 Other La1.7.1 None
SRR2101505 MDR-TB lineage4.9.1 None
SRR18911138 Other lineage3 None
SRR2101681 Sensitive lineage4.8 None
SRR2101643 Other lineage2.2.1 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101684 Other lineage2.2.1.1 None
SRR2101685 Sensitive lineage4.9 None
SRR2101691 Other lineage2.2.1 None
SRR2101786 Sensitive lineage4.4.1.1 None
SRR6896178 Sensitive lineage2.2.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21686601 Other lineage1.2.1.2.1 None
SRR21728710 Other lineage4.1.1.3 None
ERR1679641 Other lineage4.6.4 None
SRR5526841 MDR-TB lineage2.2.1.1 None
SRR6046152 Other lineage4.9 None
ERR2851371 Other lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR2101816 Other lineage4.8 None
SRR21675949 Other lineage4.3.3 None
SRR21676929 Other lineage1.2.1.2.1 None
ERR1034791 RR-TB None
SRR6982078 Sensitive None
SRR6982106 Sensitive lineage4.8 None
SRR6982140 Other lineage2.2 None
SRR6982139 Sensitive lineage4.9 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6982419 Other lineage4.8 None
SRR6896340 HR-TB lineage4.4.1.1 None