EBG00000313339 - n.1033C>T
Drug resistance types
15 Sensitive
3 RR-TB
10 HR-TB
22 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 12 |
| lineage4.4.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage5.1.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.9 | 10 |
| lineage4.2.2.1 | 1 |
| La2 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.2.1.2 | 2 |
| lineage4.3.3 | 4 |
| lineage2.2.2 | 3 |
| lineage4 | 3 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 6 |
| lineage4.6.2.2 | 3 |
| lineage3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4;lineage3 | 1 |
| lineage4.6 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.1 | 2 |
| La1.3 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR751345 | Other | lineage5.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10397156 | MDR-TB | lineage2.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16370233 | Other | lineage1.2.1.2 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR19224247 | Other | lineage1.2.1.2 | None | ERR8025498 | Pre-XDR-TB | lineage2.2.2 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4820484 | Other | lineage4.8 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4819910 | Other | lineage4.9 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4821811 | RR-TB | lineage4.9 | None | ERR4829615 | Sensitive | lineage4.3.3 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4830674 | Sensitive | lineage4.1.2.1 | dz | ERR4830864 | MDR-TB | lineage4.4.1.1 | sz | ERR4829536 | Sensitive | lineage2.2.1 | it | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR4829431 | Sensitive | lineage4.6.2.2 | None | ERR4830701 | Other | lineage4;lineage3 | dz | ERR4829623 | Sensitive | lineage4.8 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828805 | Other | lineage4.6 | None | ERR4829772 | MDR-TB | lineage4.1.2.1 | None | ERR4829725 | HR-TB | lineage4.6.2.2 | it | ERR4830892 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829788 | MDR-TB | lineage4.3.3 | it | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR10796597 | Other | lineage4 | None | ERR2486955 | Sensitive | lineage4.3.3 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR7131195 | Other | lineage2.2.1 | None | SRR8649119 | Other | lineage4.6 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769453 | Other | La1.3 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
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