EBG00000313339 - n.1239A>T
Drug resistance types
11 Sensitive
7 RR-TB
18 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
45 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage3.1.3 | 1 |
| lineage4.1.2.1 | 9 |
| lineage4.9 | 12 |
| lineage4 | 8 |
| lineage4.4.2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4.8 | 10 |
| lineage4.4.1.1 | 3 |
| lineage4.6.2.2 | 4 |
| lineage4;lineage2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage3 | 3 |
| lineage1.1.3.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage3.1.2 | 1 |
| La1.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3 | 1 |
| 1 | |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21710932 | Other | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR2027297 | RR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4818561 | HR-TB | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817707 | Other | lineage4.9 | gb | ERR4818655 | Other | lineage4.3.3 | None | ERR4817958 | Other | lineage4.2.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819331 | Sensitive | lineage4.3.4.2 | gb | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820498 | HR-TB | lineage4.8 | gb | ERR4821812 | Other | lineage4.8 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821054 | Other | lineage3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR4821505 | Other | La1.3 | gb | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6045359 | Sensitive | lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4829208 | RR-TB | lineage4.8 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6369875 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR6982246 | Sensitive | lineage4 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR067712 | HR-TB | lineage4 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796630 | HR-TB | None | ERR10796599 | Other | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR6197034 | Other | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR3283051 | Other | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473279 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None |
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