EBG00000313339 - n.2844C>T
Drug resistance types
45 Sensitive
5 RR-TB
0 HR-TB
19 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 1 |
| lineage4.8 | 3 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.3 | 4 |
| lineage4.6.1.1 | 12 |
| lineage2.2.1 | 9 |
| lineage4.9 | 11 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage5.1.1 | 4 |
| lineage4.1 | 1 |
| lineage3 | 4 |
| lineage4.3.4.2.1 | 3 |
| lineage4.6.1.2 | 3 |
| lineage4.9.1 | 1 |
| La1.8.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 8 |
| lineage4.1.1.3 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage6.2.1 | 1 |
| lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 83 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4820829 | Other | lineage4.8 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1049744 | Sensitive | lineage4.6.1.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR1140586 | Sensitive | lineage4.9 | None | SRR1062865 | Sensitive | lineage2.2.2 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR1049724 | MDR-TB | lineage4.6.1.1 | None | SRR1062868 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SAMN02381047 | Sensitive | lineage4.6.1.1 | None | ERR405191 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR1140627 | Sensitive | lineage4.6.1.1 | None | ERR4819641 | Other | lineage4.6.2.2 | None | ERR751336 | Sensitive | lineage5.1.1 | None | SRR3105762 | Sensitive | lineage4.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR7535082 | Other | lineage4.9 | None | SRR7535053 | Sensitive | lineage3 | None | ERR405186 | Sensitive | lineage4.3.4.2.1 | None | SRR1062937 | Sensitive | lineage4.6.1.1 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR1049743 | Sensitive | lineage4.6.1.1 | None | SRR1062869 | Sensitive | lineage4.9.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | ERR3468578 | Sensitive | La1.8.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4817194 | Sensitive | lineage4.1.2.1 | None | ERR1023494 | Sensitive | lineage3 | None | SRR1062902 | MDR-TB | lineage4.4.1.1 | None | ERR751338 | Other | lineage5.1.1 | None | SRR1049723 | MDR-TB | lineage4.6.1.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4821054 | Sensitive | lineage3 | None | SRR1049736 | Sensitive | lineage4.9 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | ERR405194 | Sensitive | lineage4.1.2.1 | None | SRR4033434 | Sensitive | lineage4.3.2.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | ERR4815257 | Sensitive | lineage4.4.1.1 | None | ERR5987249 | MDR-TB | lineage4.3.2 | None | SRR1062895 | Sensitive | lineage4.6.1.1 | None | ERR405215 | Sensitive | lineage2.2.1 | None | SRR1141261 | Sensitive | lineage4.9 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR751332 | Sensitive | lineage6.2.1 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | ERR405217 | Sensitive | lineage2.2.1 | None | SRR1049735 | Sensitive | lineage4.9 | None | SRR4033544 | Sensitive | lineage4.3.2.1 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR5908213 | Sensitive | lineage4.3.3 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | ERR751329 | Sensitive | lineage5.1.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR7535074 | Sensitive | lineage3 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR638895 | Sensitive | lineage4.9 | None | SRR1062927 | MDR-TB | lineage4.6.1.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None |
|---|
