EBG00000313339 - n.1049G>A
Drug resistance types
11 Sensitive
20 RR-TB
11 HR-TB
13 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
128 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 5 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 25 |
| lineage2.2.1 | 25 |
| lineage4.6.2.2 | 6 |
| lineage4.8 | 16 |
| lineage3 | 24 |
| lineage4.3.4.1 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4 | 5 |
| lineage4.5 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.1 | 6 |
| lineage4.9 | 5 |
| lineage4.3.4.2 | 3 |
| lineage1.1.3.1 | 5 |
| 4 | |
| lineage4.1.1 | 3 |
| lineage4.3.3 | 14 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.2.2.2 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1.3 | 2 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage6 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1.3 | 1 |
| lineage4.6.5 | 1 |
| lineage4.1 | 2 |
| lineage5 | 1 |
| lineage6.2.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2 | 1 |
| lineage4.6 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 195 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513681 | Other | lineage1.1.2 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819269 | Sensitive | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819593 | Other | lineage4.5 | None | ERR4819550 | Other | lineage3 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2515032 | Other | lineage3 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820833 | HR-TB | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821028 | Sensitive | lineage3.1.1 | None | ERR4821906 | Other | lineage4.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821829 | Other | lineage1.1.2 | None | ERR4821093 | Other | lineage4.3.3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6046291 | Other | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829261 | Other | lineage2.2.1 | None | ERR4829289 | Other | lineage4.1.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6046208 | Other | lineage4 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829337 | Other | lineage4.8 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR8217901 | MDR-TB | lineage1.1.1.1 | None | SRR6046729 | Other | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR10796578 | Other | lineage2.2.1 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796634 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | ERR4820891 | Sensitive | lineage4.9 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR2514351 | Sensitive | lineage3 | gb | ERR2515077 | Sensitive | lineage3 | gb | ERR9117781 | Other | lineage3.1.3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815268 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303808 | Sensitive | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR19304109 | Other | lineage4.8 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR18213721 | Other | lineage4.8 | None | SRR19303805 | Other | lineage4.8 | None | SRR19303985 | Other | lineage4.8 | None | ERR4815165 | Other | lineage4.1.2.1 | None | ERR4815618 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814362 | Other | lineage4.8 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815467 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4814841 | Other | lineage4.1 | None | ERR4815738 | Other | lineage3 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4814952 | Sensitive | lineage3 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816086 | Other | lineage4.2.2.2 | None | ERR4816232 | Other | lineage4 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | SRR3675565 | Other | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816464 | Other | lineage3 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816627 | Other | lineage2.2 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816696 | Other | lineage3 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR4818988 | Other | lineage1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR4817874 | Other | lineage3 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4818810 | Other | lineage2.2.1 | None | ERR4819078 | Other | lineage4.3.3 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818556 | Other | lineage3 | None | SRR5007186 | Other | lineage4.6 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR2512872 | Sensitive | lineage4.2.1.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819058 | HR-TB | lineage3 | None | ERR4817568 | Other | lineage4.1.2.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4819131 | Other | lineage4 | None |
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